BQ623909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 38/136 (27.94%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 50 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIE 178
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 38/136 (27.94%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 62 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIE 190
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 38/136 (27.94%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 57 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIE 185
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11 Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRF 411 G+L + E + F+ G + K+I + + Y F+EF A L NG + E ++NWA+ + +K+D + +FVGDL+ ++T ++ F A + A+VV D TG++KGYGFV F Sbjct: 14 GNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSF 145
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.943e-11 Identity = 47/153 (30.72%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGA--GEKRDDTP-----DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLPA 438 G+L Y +D L F G V +VI N+ T Q G+GF+ + AE+ ++ +N + N RL + A GE+ + P + I+VG++ + D L++ F + + A+VV DR TGR++G+GFV E+E A Sbjct: 141 GNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN-----RYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLF-SEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDA 287
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV1_MOUSE (ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.943e-11 Identity = 37/136 (27.21%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F+ GEV + K+IR+K G GYGF+ +++ AER + T NG + + + ++++A + D +++ L +T +++ F +R+ ++V++D+ TG ++G F+RF SE Sbjct: 31 MTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQS--KTIKVSYAR----PSSEVIKDANLYISGLPRTMTQKDVEDMF-SRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSE 159
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV1_HUMAN (ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.943e-11 Identity = 37/136 (27.21%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F+ GEV + K+IR+K G GYGF+ +++ AER + T NG + + + ++++A + D +++ L +T +++ F +R+ ++V++D+ TG ++G F+RF SE Sbjct: 31 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQS--KTIKVSYAR----PSSEVIKDANLYISGLPRTMTQKDVEDMF-SRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSE 159
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11 Identity = 49/163 (30.06%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN-------------GTPMPNGEQNF----RLNWAS----FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 G+L + +D L F G V V+VI +K TG+ G+GF+ S + E Q FN G P P E F R ++ S +G G + ++VG+L+ V D L+ F + A+V+ DR +GR+KG+GFV + E Sbjct: 96 GNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLF-SEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257 The following BLAST results are available for this feature:
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623909 ID=BQ623909; Name=BQ623909; organism=Citrus sinensis; type=EST; length=439bpback to top |