BQ623948

Overview
NameBQ623948
Unique NameBQ623948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.333e-60
Identity = 119/191 (62.30%), Postives = 142/191 (74.35%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVME+F                RA+                QHQ R+EIES F+G DFSE LTRA+FEELN DLFR TM PV+K ++D+ L+K+ IDEIVLVGGSTRIPK+QQL+K+ F+GKEP++G+NPDEAVAYGAAVQ G+LSG+   +T D++LLDV PLTLGIETVGGVMTKLI
Sbjct:  250 GDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRADKRAVQKLRREVEKAKRALSAQHQSRIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLDDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLI 438          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.333e-60
Identity = 116/191 (60.73%), Postives = 142/191 (74.35%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+++YF                RA+                +H   +EI++LF+G DFSEPLTRARFEELNNDLFR T+ PV K MED+GL+K  ID+IVLVGGSTRIPK+QQL+K++F+GKEP +G+NPDEAVAYGAAVQ G++SG   ++T DI+LLDV PLT+GIETVGGVMTKLI
Sbjct:  248 GDTHLGGEDFDQRLIDYFVKLYKKKEGKDITKDDRAVQKLRREVEKAKRTLSTEHSTMIEIDNLFEGKDFSEPLTRARFEELNNDLFRSTLKPVMKVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYGAAVQAGVISGV--EDTGDIVLLDVCPLTMGIETVGGVMTKLI 436          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.065e-60
Identity = 115/191 (60.21%), Postives = 142/191 (74.35%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR+++YF                RA+                +H   +EI++LF+G DFSEPLTRARFEELNNDLFR T+ PV K MED+GL+K  ID+IVLVGGSTRIPK+QQL+K++F+ KEP++G+NPDEAVAYGAAVQ G++SG   ++T DI+LLDV PLT+GIETVGGVMTKLI
Sbjct:  248 GDTHLGGEDFDQRLIDYFVKLYKKKEGKDITKDDRAVQKLRREVEKAKRTLSTEHSTMIEIDNLFEGKDFSEPLTRARFEELNNDLFRSTLKPVMKVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNVKEPSRGINPDEAVAYGAAVQAGVISGV--EDTGDIVLLDVCPLTMGIETVGGVMTKLI 436          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 2.514e-59
Identity = 118/191 (61.78%), Postives = 138/191 (72.25%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVM++F                RA+                 HQVR+EIES F+G DFSE LTRA+FEELN DLFR T+ PV+K +EDA + K  + EIVLVGGSTRIPKVQQL+KD+F GKEP++G+NPDEAVAYGAAVQ G+LSGE   +T  I+LLDV PLT+GIETVGGVMTKLI
Sbjct:  249 GDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGE--QDTDAIVLLDVNPLTMGIETVGGVMTKLI 437          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.168e-56
Identity = 113/191 (59.16%), Postives = 138/191 (72.25%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVM++F                +++                  Q ++EIE+ FDG D  E LTRA+FEELN DLF+KT+ PVKK +EDA  +K+QI E+VLVGGSTRIPK+QQLLKD+F+GKEPN+GV+PDEAVAYGAAVQGGI + E G +T  ++LLD+APLTLGIETVGGVMT LI
Sbjct:  252 GDTHLGGEDFDQRVMKHFLTVFQKKTGKDASKDKKSLQKLRRAAENAKRILSTSPQTQLEIENFFDGKDLIETLTRAKFEELNMDLFKKTLDPVKKVLEDAKFKKSQIHEVVLVGGSTRIPKIQQLLKDFFNGKEPNRGVHPDEAVAYGAAVQGGIFTNEEGTDT--LVLLDIAPLTLGIETVGGVMTALI 440          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.397e-56
Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLK--DYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            G+THLGGEDFDQRVM+YF                RAI                 H  ++EIE + +G +FSE LTRA+FEELN+DLFR+T+ PVKK ++DA  EK++IDEIVLVGGSTRIPK+QQ++K  ++F+GKEPN+G+NPDEAVAYGAA+Q GI+ GE   E +D++LLDV PLTLGIETVGG+MT+LI
Sbjct:  247 GNTHLGGEDFDQRVMDYFIKMFKKKNNIDLRTDKRAIQKLRKEVEIAKRNLSVVHSTQIEIEDIVEGHNFSETLTRAKFEELNDDLFRETLEPVKKVLDDAKYEKSKIDEIVLVGGSTRIPKIQQIIKEFEFFNGKEPNRGINPDEAVAYGAAIQAGIILGE---ELQDVVLLDVTPLTLGIETVGGIMTQLI 436          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 3.397e-56
Identity = 109/191 (57.07%), Postives = 141/191 (73.82%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQR++ +F                +A+G               Q   R+EIE+ +DG DFSE LTRA+FEELNNDLF+KT+ PV++ ++DA + K++ID+IVLVGGSTRIPKVQ L++++F+GK+ +KG+NPDEAVA+GAAVQ G+LSGE G  T+DI+L+DV PLTLGIET GGVMTKLI
Sbjct:  258 GDTHLGGEDFDQRIINHFAKLFNKKHGVDVTKDAKAMGKLKREAEKAKRTLSSQMSTRIEIEAFYDGKDFSETLTRAKFEELNNDLFKKTLKPVEQVLKDAKVSKSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGEEG--TEDIVLMDVNPLTLGIETTGGVMTKLI 446          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 4.437e-56
Identity = 111/191 (58.12%), Postives = 135/191 (70.68%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  VEI+SLF+GIDF   +TRARFEEL  DLFR T+ PV+K + DA L+K+Q+DEIVLVGGSTRIPKVQ+L+ DYF+GKEPN+ +NPDEAVAYGAAVQ  IL+G+   +T+D+LLLDVAPL+LGIET GGVMTKLI
Sbjct:  221 GDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLI 411          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 217.238 bits (552), Expect = 4.437e-56
Identity = 111/191 (58.12%), Postives = 135/191 (70.68%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  VEI+SLF+GIDF   +TRARFEEL  DLFR T+ PV+K + DA L+K+Q+DEIVLVGGSTRIPKVQ+L+ DYF+GKEPN+ +NPDEAVAYGAAVQ  IL+G+   +T+D+LLLDVAPL+LGIET GGVMTKLI
Sbjct:  221 GDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLI 411          
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 7.568e-56
Identity = 111/191 (58.12%), Postives = 133/191 (69.63%), Query Frame = 3
Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SLFDGIDF  P+TRARFEELN DLFRK M PV+K + DA ++KN ID++VLVGGSTRIPKVQQLL D+F+GKE  K +NPDEAVAYGAAVQ  ILSGEG ++ +D+LLLDV PL+LG+ET GGVMT LI
Sbjct:  230 GDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFDGIDFYAPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420          
The following BLAST results are available for this feature:
BLAST of BQ623948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_XENLA1.333e-6062.3078 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_ECHGR1.333e-6060.7378 kDa glucose-regulated protein OS=Echinococcus g... [more]
GRP78_ECHMU5.065e-6060.2178 kDa glucose-regulated protein OS=Echinococcus m... [more]
HSP7C_DROME2.514e-5961.78Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
BIP2_DICDI1.168e-5659.16Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_PLAFO3.397e-5657.5178 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_NEUCR3.397e-5657.0778 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP72_YEAST4.437e-5658.12Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST4.437e-5658.12Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP73_ARATH7.568e-5658.12Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01039 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01039 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623948 ID=BQ623948; Name=BQ623948; organism=Citrus sinensis; type=EST; length=575bp
ATGGAGACACTCATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAG
TACTTTATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGA
CAAAAGGGCTATTGGCAAGCTCAGGAGGGAAGCTGAACGTGCTAAGAGAG
CTCTCAGCAGCCAGCACCAGGTCCGTGTTGAAATTGAGTCACTTTTCGAT
GGCATTGACTTCTCCGAGCCACTTACTAGGGCTCGCTTTGAGGAGTTGAA
TAATGACTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCCATGGAAG
ATGCTGGATTAGAGAAGAATCAGATTGATGAGATTGTTCTTGTTGGTGGT
AGTACTAGGATTCCCAAGGTTCAACAGCTTCTCAAAGACTATTTTGATGG
TAAAGAGCCTAACAAGGGTGTGAACCCAGATGAGGCAGTTGCTTATGGTG
CTGCTGTACAAGGTGGCATCTTGAGTGGTGAAGGTGGTGATGAAACCAAA
GATATCCTTCTCTTGGATGTGGCTCCACTCACCCTTGGTATCGAGACAGT
TGGTGGGGTGATGACCAAGTTGATC
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