BQ623948 | Citrus Genome Database

Overview


Name	BQ623948
Unique Name	BQ623948
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	575

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.686e-55
Identity = 111/191 (58.12%), Postives = 137/191 (71.73%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD RV+++F                + IG               Q   R+EIES FDG DFSE LTRA+FEELN DLF++T+ PV++ ++D+G++K  + +IVLVGGSTRIPKVQ+LL+ +FDGK+ +KG+NPDEAVAYGAAVQ G+LSGE G E  DI+LLDV PLTLGIET GGVMTKLI
Sbjct:  256 GDTHLGGEDFDYRVIKHFVKQYNKKHDVDITKNAKTIGKLKREVEKAKRTLSSQMSTRIEIESFFDGEDFSETLTRAKFEELNIDLFKRTLKPVEQVLKDSGVKKEDVHDIVLVGGSTRIPKVQELLEKFFDGKKASKGINPDEAVAYGAAVQAGVLSGEDGVE--DIVLLDVNPLTLGIETTGGVMTKLI 444

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.876e-55
Identity = 109/191 (57.07%), Postives = 140/191 (73.30%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVM++F                +A+G               Q   R+EIE+  +G DFSE LTRA+FEELN DLF+KT+ PV++ ++DA ++K+++D+IVLVGGSTRIPKVQ LL+++F GK+ +KG+NPDEAVA+GAAVQGG+LSGE G  T D++L+DV PLTLGIET GGVMTKLI
Sbjct:  268 GDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEEG--TGDVVLMDVNPLTLGIETTGGVMTKLI 456

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.876e-55
Identity = 109/191 (57.07%), Postives = 140/191 (73.30%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVM++F                +A+G               Q   R+EIE+  +G DFSE LTRA+FEELN DLF+KT+ PV++ ++DA ++K+++D+IVLVGGSTRIPKVQ LL+++F GK+ +KG+NPDEAVA+GAAVQGG+LSGE G  T D++L+DV PLTLGIET GGVMTKLI
Sbjct:  268 GDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEEG--TGDVVLMDVNPLTLGIETTGGVMTKLI 456

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.876e-55
Identity = 109/191 (57.07%), Postives = 140/191 (73.30%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFDQRVM++F                +A+G               Q   R+EIE+  +G DFSE LTRA+FEELN DLF+KT+ PV++ ++DA ++K+++D+IVLVGGSTRIPKVQ LL+++F GK+ +KG+NPDEAVA+GAAVQGG+LSGE G  T D++L+DV PLTLGIET GGVMTKLI
Sbjct:  268 GDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLKREVEKAKRTLSSQMSTRIEIEAFHNGEDFSETLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEEG--TGDVVLMDVNPLTLGIETTGGVMTKLI 456

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.756e-55
Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL++GIDF   +TRARFEEL  DLFR T+ PV+K ++DA L+K+Q++EIVLVGGSTRIPKVQ+L+ D+F+GKEPNK +NPDEAVAYGAAVQ  IL+G+   +T+D+LLLDVAPL+LGIET GGVMTKLI
Sbjct:  222 GDTHLGGEDFDNRLVNHFINEFKRKNKKDICGNQRALRRLRTACERAKTTLSSSAQTSLEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVLKDAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLI 412

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 4.905e-55
Identity = 107/191 (56.02%), Postives = 134/191 (70.16%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL++GIDF   +TRARFEEL  DLFR T+ PV K + DA ++K+++DEIVLVGGSTRIPKVQ+L+ DYF+GKEPN+ +NPDEAVAYGAAVQ  ILSG+   +T+D+LLLDVAPL+LGIET GG+MTKLI
Sbjct:  222 GDTHLGGEDFDNRLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLEPVDKVLSDAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDLLLLDVAPLSLGIETAGGIMTKLI 412

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 8.367e-55
Identity = 108/191 (56.54%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  VEI+SL++GIDF   +TRARFEEL  DLFR T+ PV+K M D  L+K+Q+ EIVLVGGSTRIPK+Q+L+ D+F+GKEPNK +NPDEAVAYGAAVQ  IL+G+   +T+D+LLLDVAPL+LGIET GGVMTKLI
Sbjct:  224 GDTHLGGEDFDNRLVNHFANEFKRKYKKDLTTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVMRDGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLI 414

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.153e-54
Identity = 108/191 (56.54%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SLF+GIDF   +TRARFEELN DLFR TM PV+K++ DA ++K+QI +IVLVGGSTRIPKVQ+LL+D+F+GKE NK +NPDEAVAYGAAVQ  IL G+  +E +D+LLLDV PL+LGIET GGVMT LI
Sbjct:  224 GDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLI 414

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.153e-54
Identity = 110/191 (57.59%), Postives = 132/191 (69.11%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD +++                   +A+                Q   R+EI+S  DGID SE LTRA+FEELN DLF+KT+ PV+K ++D+GLEK  +D+IVLVGGSTRIPKVQQLL+ YFDGK+ +KG+NPDEAVAYGAAVQ G+LSGE G E  DI+LLDV  LTLGIET GGVMT LI
Sbjct:  269 GDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLSGEEGVE--DIVLLDVNALTLGIETTGGVMTPLI 457

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 5.424e-54
Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +                 R++                  Q  +EI+SLF+G+DF   LTRARFEEL  DLFR T+ PV+K ++D+ L+K+QIDEIVLVGGSTRIPK+Q+L+ D+F+GKEPN+ +NPDEAVAYGAAVQ  IL+G+   +T+D+LLLDVAPL+LGIET GG+MTKLI
Sbjct:  222 GDTHLGGEDFDNRLVNHLATEFKRKTKKDISNNQRSLRRLRTAAERAKRALSSSSQTSIEIDSLFEGMDFYTSLTRARFEELCADLFRSTLEPVEKVLKDSKLDKSQIDEIVLVGGSTRIPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSTKTQDLLLLDVAPLSLGIETAGGIMTKLI 412

The following BLAST results are available for this feature:

BLAST of BQ623948 vs. ExPASy Swiss-Prot

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
GRP78_YARLI	1.686e-55	58.12	78 kDa glucose-regulated protein homolog OS=Yarrow...	[more]
GRP78_ASPNG	2.876e-55	57.07	78 kDa glucose-regulated protein homolog OS=Asperg...	[more]
GRP78_ASPKA	2.876e-55	57.07	78 kDa glucose-regulated protein homolog OS=Asperg...	[more]
GRP78_ASPAW	2.876e-55	57.07	78 kDa glucose-regulated protein homolog OS=Asperg...	[more]
HSP72_PICAN	3.756e-55	56.54	Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ...	[more]
HSP72_CANAL	4.905e-55	56.02	Heat shock protein SSA2 OS=Candida albicans GN=SSA...	[more]
HSP71_PICAN	8.367e-55	56.54	Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ...	[more]
HSP7D_MANSE	4.153e-54	56.54	Heat shock 70 kDa protein cognate 4 OS=Manduca sex...	[more]
GRP78_YEAST	4.153e-54	57.59	78 kDa glucose-regulated protein homolog OS=Saccha...	[more]
HSP73_YEAST	5.424e-54	54.97	Heat shock protein SSA3 OS=Saccharomyces cerevisia...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_01039 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01039 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>BQ623948 ID=BQ623948; Name=BQ623948; organism=Citrus sinensis; type=EST; length=575bp
ATGGAGACACTCATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAG
TACTTTATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGA
CAAAAGGGCTATTGGCAAGCTCAGGAGGGAAGCTGAACGTGCTAAGAGAG
CTCTCAGCAGCCAGCACCAGGTCCGTGTTGAAATTGAGTCACTTTTCGAT
GGCATTGACTTCTCCGAGCCACTTACTAGGGCTCGCTTTGAGGAGTTGAA
TAATGACTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCCATGGAAG
ATGCTGGATTAGAGAAGAATCAGATTGATGAGATTGTTCTTGTTGGTGGT
AGTACTAGGATTCCCAAGGTTCAACAGCTTCTCAAAGACTATTTTGATGG
TAAAGAGCCTAACAAGGGTGTGAACCCAGATGAGGCAGTTGCTTATGGTG
CTGCTGTACAAGGTGGCATCTTGAGTGGTGAAGGTGGTGATGAAACCAAA
GATATCCTTCTCTTGGATGTGGCTCCACTCACCCTTGGTATCGAGACAGT
TGGTGGGGTGATGACCAAGTTGATC