BQ623948 | Citrus Genome Database

Overview


Name	BQ623948
Unique Name	BQ623948
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	575

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.208e-53
Identity = 107/191 (56.02%), Postives = 132/191 (69.11%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL++GIDF   +TRARFEELN DLFR T+ PV+KA+ DA ++K QI +IVLVGGSTRIPK+Q+LL+DYF+GKE NK +NPDEAVAYGAAVQ  ILSG+  +  +D+LLLDV PL+LGIET GGVMT LI
Sbjct:  224 GDTHLGGEDFDNRMVNHFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLI 414

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.208e-53
Identity = 104/191 (54.45%), Postives = 134/191 (70.16%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD+R++ +F                RA+                  Q  +E++SLF+G+DF+  +TRARFEEL  DLFRK M PV+K + DA ++K  + ++VLVGGSTRIPKVQQLL+D+F+GKE NK +NPDEAVAYGAAVQ  IL+GEGG++ +D+LLLDV PL+LG+ET GGVMT LI
Sbjct:  230 GDTHLGGEDFDERLVNHFANEFQRKYKKDLKTSPRALRRLRTACERAKRTLSSAAQTTIELDSLFEGVDFATSITRARFEELCMDLFRKCMDPVEKCLHDAKMDKMTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.208e-53
Identity = 109/191 (57.07%), Postives = 138/191 (72.25%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD RV+ Y                 +A+G               Q  VR+EIES F+G DFSE L+RA+FEE+N DLF+KT+ PV++ ++D+ L+K++ID+IVLVGGSTRIPKVQ+LL+ +F GK+ +KG+NPDEAVAYGAAVQ G+LSGE G +  +I+LLDV PLTLGIET GGVMTKLI
Sbjct:  254 GDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLI 441

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53
Identity = 106/191 (55.50%), Postives = 131/191 (68.59%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL+ G DF  P+TRARFEE+N DLFRK M PV+K + DA ++K+ + EIVLVGGSTRIPKVQQLL+D+F+GKE  K +NPDEAVAYGAAVQ  ILSGEG ++ +D+LLLDV PL+LG+ET GGVMT LI
Sbjct:  230 GDTHLGGEDFDNRMVNHFVQEFKRKNKQDITGQPRALRRLRTACERAKRTLSSTAQTTIEIDSLYGGADFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI 420

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53
Identity = 105/191 (54.97%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL++GIDF   +TRARFEEL  DLFR T+ PV K + DA ++K+Q++EIVLVGGSTRIPK+Q+L+ D+F+GKE NK +NPDEAVAYGAAVQ  IL+G+   +T+DILLLDVAPL+LGIET GG+MTKLI
Sbjct:  223 GDTHLGGEDFDNRLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLDPVGKVLADAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTGDTSSKTQDILLLDVAPLSLGIETAGGIMTKLI 413

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53
Identity = 108/191 (56.54%), Postives = 130/191 (68.06%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++  F                RA+                  Q  +EI+SLF+GIDF   +TRARFEELN DLFR T+ PV+KA+ DA L+K QI EIVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ  IL G+  +  +D+LLLDV PL+LGIET GGVMT LI
Sbjct:  227 GDTHLGGEDFDNRMVNRFVEEFKGKHKRDNAGNKRAVRRLRTACERARRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALI 417

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53
Identity = 110/191 (57.59%), Postives = 131/191 (68.59%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD +++                   +A+                Q   R+EI+S  DGID SE LTRA+FEELN DLF+KT+ PV+K +EDAGLEK  ID+ VLVGGSTRIPKVQQLL+ +F+GK+ +KG+NPDEAVAYGAAVQ G+LSGE G E  DI+LLDV  LTLGIET GGVMT LI
Sbjct:  255 GDTHLGGEDFDYKIVRQLIKTFKKKHGIDVSDNEKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLEDAGLEKKDIDDFVLVGGSTRIPKVQQLLESFFNGKKASKGINPDEAVAYGAAVQAGVLSGEEGVE--DIVLLDVNALTLGIETTGGVMTPLI 443

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 106/191 (55.50%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SL++GIDF   +TRARFE+LN DLFR T+ PV+KA+ DA L+K+QI +IVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ  ILSG+  +  +D+LLLDV PL+LGIET GGVMT LI
Sbjct:  224 GDTHLGGEDFDNRLVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEKLNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLI 414

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53
Identity = 109/191 (57.07%), Postives = 135/191 (70.68%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD +++ +F                +A+                Q   R+EI+S F+GIDFSE LTRA+FEELN  LF+KT+ PV+K ++D+GL+K  ID+IVLVGGSTRIPKVQQLL+ +F+GK+ +KG+NPDEAVAYGAAVQ G+LSGE G E  DI+LLDV  LTLGIET GGVMT LI
Sbjct:  270 GDTHLGGEDFDYKLVRHFAQLFQKKHDLDVTKNDKAMAKLKREAEKAKRSLSSQTSTRIEIDSFFNGIDFSETLTRAKFEELNLALFKKTLKPVEKVLKDSGLQKEDIDDIVLVGGSTRIPKVQQLLEKFFNGKKASKGINPDEAVAYGAAVQAGVLSGEEGVE--DIVLLDVNALTLGIETTGGVMTPLI 458

[Close]

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.516e-53
Identity = 107/191 (56.02%), Postives = 130/191 (68.06%), Query Frame = 3

Query:    3 GDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLI 575
            GDTHLGGEDFD R++ +F                RA+                  Q  +EI+SLF+G+DF   +TRARFEELN DLFR TM PV KA+ DA ++K QI +IVLVGGSTRIPKVQ+LL+D+F+GKE NK +NPDEAVAYGAAVQ  IL G+  +  +D+LLLDV PL+LGIET GGVMT LI
Sbjct:  224 GDTHLGGEDFDNRLVNHFVQEFQRKHKKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDLLLLDVTPLSLGIETAGGVMTTLI 414

The following BLAST results are available for this feature:

BLAST of BQ623948 vs. ExPASy Swiss-Prot

BLAST of BQ623948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
HSP7C_DANRE	1.208e-53	56.02	Heat shock cognate 71 kDa protein OS=Danio rerio G...	[more]
HSP70_CHLRE	1.208e-53	54.45	Heat shock 70 kDa protein OS=Chlamydomonas reinhar...	[more]
GRP78_SCHPO	1.208e-53	57.07	78 kDa glucose-regulated protein homolog OS=Schizo...	[more]
HSP72_ARATH	2.061e-53	55.50	Heat shock cognate 70 kDa protein 2 OS=Arabidopsis...	[more]
HSP71_CANAL	2.061e-53	54.97	Heat shock protein SSA1 OS=Candida albicans GN=SSA...	[more]
HSP70_CHICK	2.061e-53	56.54	Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV...	[more]
GRP78_CANGA	2.061e-53	57.59	78 kDa glucose-regulated protein homolog OS=Candid...	[more]
HSP7C_CHICK	2.692e-53	55.50	Heat shock cognate 71 kDa protein OS=Gallus gallus...	[more]
GRP78_KLULA	2.692e-53	57.07	78 kDa glucose-regulated protein homolog OS=Kluyve...	[more]
HSP7A_DROME	3.516e-53	56.02	Heat shock 70 kDa protein cognate 1 OS=Drosophila ...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_01039 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01039 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>BQ623948 ID=BQ623948; Name=BQ623948; organism=Citrus sinensis; type=EST; length=575bp
ATGGAGACACTCATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAG
TACTTTATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGA
CAAAAGGGCTATTGGCAAGCTCAGGAGGGAAGCTGAACGTGCTAAGAGAG
CTCTCAGCAGCCAGCACCAGGTCCGTGTTGAAATTGAGTCACTTTTCGAT
GGCATTGACTTCTCCGAGCCACTTACTAGGGCTCGCTTTGAGGAGTTGAA
TAATGACTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCCATGGAAG
ATGCTGGATTAGAGAAGAATCAGATTGATGAGATTGTTCTTGTTGGTGGT
AGTACTAGGATTCCCAAGGTTCAACAGCTTCTCAAAGACTATTTTGATGG
TAAAGAGCCTAACAAGGGTGTGAACCCAGATGAGGCAGTTGCTTATGGTG
CTGCTGTACAAGGTGGCATCTTGAGTGGTGAAGGTGGTGATGAAACCAAA
GATATCCTTCTCTTGGATGTGGCTCCACTCACCCTTGGTATCGAGACAGT
TGGTGGGGTGATGACCAAGTTGATC