BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27
Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AAL+++KI+CMHGG+   + +++QI N+ RPI +    + L DLLW+DP ++  +EG   N RG    TFG D+V+EF  ++DL LI RAH+ V DG+E FA+  L+T+FS P
Sbjct:  128 NRIYGFYDECKRRYNVR----LWKTFTDCFNCLPVAALVDEKILCMHGGLSPELKNLDQIRNIARPIDVPDHGL-LCDLLWADPDKD--LEGWGENDRGVSF-TFGADKVVEFLEHHDLDLICRAHQVVEDGYEFFAKRKLVTVFSAP 267          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP++ALI++KI+CMHGG+   +N +EQI NL RP  +    + L DLLWSDP+  +   G   N RG    TFGPD+V EF   +DL LI RAH+ V DG+E FA   L+T+FS P
Sbjct:  128 NRIYGFYDECKRRFSVK----LWKTFTDCFNCLPVSALIDEKILCMHGGLSPELNKLEQILNLNRPTDVPDTGL-LCDLLWSDPS--NEATGWAINDRGVSF-TFGPDKVSEFLEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAP 267          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.483e-27
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AALI++KI+CMHGG+   + +++QI NL RP T    S +L DLLWSDP+    V+G   N RG    TFGPD+V EF   +D+ L+ RAH+ V DG+E FA+  L+T+FS P
Sbjct:  142 NRIYGFYDECKRRFNVK----LWKCFTECFNCLPVAALIDEKILCMHGGLSPVLTNLDQIRNLPRP-TDVPDSGLLCDLLWSDPSRE--VKGWGMNDRGVSY-TFGPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAP 281          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_PHAVU (Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.937e-27
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP++ALI+ KI+CMHGG+   +  ++QI+ +QRP T    S +L DLLWSDP  + S+EG   + RG    TFGPD V EF + NDL L+ R H+ V DG+E FA+  L+T+FS P
Sbjct:  125 NRIYGFYDECKRRFNVR----LWKIFTDCFNCLPVSALIDDKILCMHGGLSPELESLDQIKEIQRP-TEIPDSGLLCDLLWSDP--DSSIEGWAESDRGVSC-TFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAP 264          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.530e-27
Identity = 67/149 (44.97%), Postives = 95/149 (63.76%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITM-EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AA+I++KI+CMHGG+   + +VEQI+N++RP  + +AG  +L DLLWSDP+++  V+G   N RG    TFG D+V EF   ND+ L+ RAH+ V DG+E FA   L+T+FS P
Sbjct:  137 NRIYGFYDECKRRFNVK----LWKVFTDTFNCLPVAAVIDEKILCMHGGLSPELINVEQIKNIERPTDVPDAG--LLCDLLWSDPSKD--VKGWGMNDRGVSY-TFGADKVAEFLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAP 276          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_BRANA (Serine/threonine-protein phosphatase PP1 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.635e-27
Identity = 67/148 (45.27%), Postives = 89/148 (60.14%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AALI+ KI+CMHGG+   ++++ QI  +QRP T    S +L DLLWSDP +   +EG   + RG    TFG D+V EF + NDL LI R H+ V DG+E FA+  L+T+FS P
Sbjct:   69 NRIYGFYDECKRRFNVR----LWKIFTDCFNCLPVAALIDDKILCMHGGLSPELDNLNQIREIQRP-TEIPDSGLLCDLLWSDPDQK--IEGWADSDRGISC-TFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAP 208          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 9.612e-27
Identity = 66/148 (44.59%), Postives = 89/148 (60.14%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AALI+ KI+CMHGG+   + H+++I++L RP  +    + L DLLWSDP ++  V+G   N RG    TFG D+V EF   +DL LI RAH+ V DG+E FA   L+T+FS P
Sbjct:  142 NRIYGFYDECKRRFNVR----LWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLTHLDEIKSLPRPTDVPDTGL-LCDLLWSDPGKD--VQGWGMNDRGVSY-TFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAP 281          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26
Identity = 67/148 (45.27%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AALI++KI C HGG+   + ++EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFGPD V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRFS----IKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGL-LCDLLWSDPDKD--VTGWGENDRGVSF-TFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.640e-26
Identity = 67/148 (45.27%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AALI++KI C HGG+   + ++EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFGPD V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRFS----IKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGL-LCDLLWSDPDKD--VTGWGENDRGVSF-TFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.141e-26
Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AA++++KI+CMHGG+   +  +EQI  + RP  +    + L DLLW+DP ++  V+G   N RG    TFGPD V EF   +DL L+ RAH+ V DG+E FA+  L+TLFS P
Sbjct:  128 NRIYGFYDECKRRYNIR----LWKTFTDCFNCLPVAAIVDEKILCMHGGLSPELKTLEQIRRIPRPTDVPDTGL-LCDLLWADPDKD--VQGWGENDRGVSY-TFGPDTVTEFLQRHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAP 267          
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP1_MEDVA1.483e-2743.92Serine/threonine-protein phosphatase PP1 OS=Medica... [more]
PP1_MAIZE1.483e-2745.27Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]
PP11_TOBAC1.483e-2745.27Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1_PHAVU1.937e-2745.27Serine/threonine-protein phosphatase PP1 OS=Phaseo... [more]
PP15_ARATH2.530e-2744.97Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP1_BRANA5.635e-2745.27Serine/threonine-protein phosphatase PP1 (Fragment... [more]
PP1_ORYSJ9.612e-2744.59Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
GLC7A_CAEEL1.640e-2645.27Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR1.640e-2645.27Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP11_ACECL2.141e-2643.24Serine/threonine-protein phosphatase PP1 isozyme 1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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