BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BB_RAT (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp3cb PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.921e-12
Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEN----DSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  ER     +      F+ LPLAAL+ ++ +C+HGG+   I+ ++ I  L R     A    + DLLWSDP+E+     S E    N        +    V EF  NN+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  169 FTFKQECKIKYSER----VYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFG-PMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 318          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BB_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Mus musculus GN=Ppp3cb PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.921e-12
Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEN----DSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  ER     +      F+ LPLAAL+ ++ +C+HGG+   I+ ++ I  L R     A    + DLLWSDP+E+     S E    N        +    V EF  NN+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  169 FTFKQECKIKYSER----VYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFG-PMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 318          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BB_HUMAN (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Homo sapiens GN=PPP3CB PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.921e-12
Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEN----DSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  ER     +      F+ LPLAAL+ ++ +C+HGG+   I+ ++ I  L R     A    + DLLWSDP+E+     S E    N        +    V EF  NN+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  169 FTFKQECKIKYSER----VYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFG-PMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 318          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BC_HUMAN (Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform OS=Homo sapiens GN=PPP3CC PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEN----DSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  E+     +      F+ LPLAAL+ ++ +C+HGG+   I  ++ I  L R  T       + DLLWSDP+E+     ++E    N        +    V EF  NN+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  156 FTFKQECRIKYSEQ----VYDACMETFDCLPLAALLNQQFLCVHGGMSPEITSLDDIRKLDR-FTEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTHNTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQATGFPSLITIFSAP 305          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BC_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform OS=Mus musculus GN=Ppp3cc PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.490e-11
Identity = 52/155 (33.55%), Postives = 71/155 (45.81%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTEN----DSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  E      +      F+ LPLAAL+ ++ +C+HGG+   I  +E I  L R     A   V  DLLWSDP E+     ++E    N        F    V EF  NN L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  156 FTFKQECRIKYSEM----VYDACMHTFDCLPLAALLNQQFLCVHGGMSPEITCLEDIRKLDRFSEPPAFGPV-CDLLWSDPLEDYGSEKTLEHYTHNTVRGCSYFFSYPAVCEFLQNNSLLSIIRAHEAQDAGYRMYRKNQATGFPSLITIFSAP 305          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIG--------RSINHVEQIENLQRPITM-----EAGSIVLMDLLWSDPTENDSVEGLRPNA-RGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFS 438
            NA +GF I  +E    R+       I+ ++ WLPL +++  +++ +HGG          +SI+  + +  L+ P+T      +     + D++WSDP    +  G  PN  RG G V FGPD    F   + L  ++R+HEC  +G E      +IT+FS
Sbjct:  226 NARYGF-IREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDSTSLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDP---QATMGCVPNTLRGAG-VWFGPDVTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFS 380          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2B_SCHPO (Serine/threonine-protein phosphatase 2B catalytic subunit OS=Schizosaccharomyces pombe GN=ppb1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.319e-11
Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIG---RSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEG-----LRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQ------GHLITLFSGP 444
            F F++EC  +      I  +    + FN LPLAA++ K+ +C+HGG+     ++N +  I     P T      ++ DLLWSDP E+   E      +  N RG     +    V  F  NN+L  ++RAHE    G+  + +        L+T+FS P
Sbjct:  189 FTFKLECTHKYN----IKVYEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHG----LMCDLLWSDPLEDFGSEKSNKHFIHNNVRGCSYF-YSYQAVCTFLENNNLLSVIRAHEAQDVGYRMYRKTKTTGFPSLMTIFSAP 338          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: YY06_CAEEL (Putative serine/threonine-protein phosphatase C27B7.6 OS=Caenorhabditis elegans GN=C27B7.6 PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 5.662e-11
Identity = 46/160 (28.75%), Postives = 74/160 (46.25%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRP-ITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC----VMDGFERFAQGH-------LITLFSGP 444
            N ++GF+ E + +         W   N +F  L + A I +KI+CMHGGI   I   + +  + +P +  +    +++DL+WSDP   D  + ++ N        FG   V   C    + LI+RAHE     V   +    +GH       L+T+FS P
Sbjct:  132 NTMYGFKEEMMRKRNSH----LWKVFNDVFAELSICASINRKILCMHGGISPKIESWDSLTGMTKPRVHGDCEHGLIVDLIWSDPNRKD--DTIQFNKMRGISTLFGKSVVDNLCTTLAIDLIIRAHEMKEVYVFHLYLSSMKGHTFEFDNRLLTVFSAP 285          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BA_HUMAN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Homo sapiens GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.662e-11
Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPN-----ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  ER     +      F+ LPLAAL+ ++ +C+HGG+   IN ++ I  L R     A    + D+LWSDP E+   E  + +      RG       P  V EF  +N+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  160 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYP-AVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 309          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2BA_BOVIN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Bos taurus GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.662e-11
Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 1
Query:   10 FGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPN-----ARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGH------LITLFSGP 444
            F F+ EC  +  ER     +      F+ LPLAAL+ ++ +C+HGG+   IN ++ I  L R     A    + D+LWSDP E+   E  + +      RG       P  V EF  +N+L  I+RAHE    G+  + +        LIT+FS P
Sbjct:  160 FTFKQECKIKYSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYP-AVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 309          
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP2BB_RAT3.921e-1232.90Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BB_MOUSE3.921e-1232.90Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BB_HUMAN3.921e-1232.90Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BC_HUMAN6.688e-1231.61Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BC_MOUSE1.490e-1133.55Serine/threonine-protein phosphatase 2B catalytic ... [more]
RDGC_DROME1.946e-1130.00Serine/threonine-protein phosphatase rdgC OS=Droso... [more]
PP2B_SCHPO3.319e-1130.19Serine/threonine-protein phosphatase 2B catalytic ... [more]
YY06_CAEEL5.662e-1128.75Putative serine/threonine-protein phosphatase C27B... [more]
PP2BA_HUMAN5.662e-1132.69Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_BOVIN5.662e-1132.69Serine/threonine-protein phosphatase 2B catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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