BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.231e-26
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AALI+ KI+CMHGG+   +  +++I NL RP  +    + L DLLWSDP+    V+G   N RG    TFG D+V EF   +D+ L+ RAH+ V DG+E FA+  L+T+FS P
Sbjct:  135 NRIYGFYDECKRRFNVR----LWKTNTDCFNCLPVAALIDDKILCMHGGLSPDLTDLDEIRNLPRPTDIPDSGL-LCDLLWSDPSRE--VKGWGMNDRGVSY-TFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAP 274          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.137e-26
Identity = 64/148 (43.24%), Postives = 90/148 (60.81%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AALI++KI+CMHGG+   ++ ++QI NL RP  +    + L DL  SDP ++  V+G   N RG    TFGPD+V EF + +DL L+ RAH+ V DG+E FA+  L+T+FS P
Sbjct:  128 NRIYGFYDECKRRFNVK----LWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSLDQIRNLPRPTAIPDTGL-LCDLQRSDPGKD--VKGWGMNDRGVSY-TFGPDKVSEFLSKHDLDLVCRAHQVVEDGYEFFAESELVTIFSAP 267          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP12_YEAST (Serine/threonine-protein phosphatase PP1-2 OS=Saccharomyces cerevisiae GN=GLC7 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.063e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA+I++KI CMHGG+   +N +EQI  + RP  +    + L DLLWSDP ++  + G   N RG    TFGPD V  F    D++LI RAH+ V DG+E F++  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIIDEKIFCMHGGLSPDLNSMEQIRRVMRPTDIPDVGL-LCDLLWSDPDKD--IVGWSENDRGVSF-TFGPDVVNRFLQKQDMELICRAHQVVEDGYEFFSKRQLVTLFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP19_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana GN=TOPP9 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.388e-25
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AALI++KI+CMHGG+   + ++ QI  +QRP  +    + L DLLWSDP + +  EG   + RG    TFG D V +F + NDL LI R H+ V DG+E FA+  L+T+FS P
Sbjct:  133 NRIYGFYDECKRRFNVR----LWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLGQIREIQRPTEIPDNGL-LCDLLWSDPDQKN--EGWTDSDRGISC-TFGADVVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAP 272          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.388e-25
Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP++ALI+ KI+CMHGG+   I  ++ I  + RPI +    I L DLLW+DP     ++G   N RG    TFG D+V EF   +DL LI RAH+ V DG+E FA+  L+T+FS P
Sbjct:  128 NRVYGFYDECKRRYNVR----LWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSLDDIRRIPRPIDVPDQGI-LCDLLWADPDRE--IQGWGENDRGVSY-TFGADKVAEFLQTHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAP 267          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.388e-25
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W      FN LP+AALI+ +I+CMHGGI   +  ++QI N+ RP+ +    +V  DLLWSDP+ +    G   N RG    TFG D+V EF   +D+ LI RAH+ V DG+E FA+  L+T+FS P
Sbjct:  144 NRIYGFYDECKRRFNVR----LWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVC-DLLWSDPSGD---VGWGMNDRGVSY-TFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAP 282          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_XENLA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus laevis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_RAT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_RABIT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269          
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP12_TOBAC6.231e-2643.24Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP13_TOBAC8.137e-2643.24Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP12_YEAST1.063e-2543.24Serine/threonine-protein phosphatase PP1-2 OS=Sacc... [more]
PP19_ARATH1.388e-2543.24Serine/threonine-protein phosphatase PP1 isozyme 9... [more]
PP16_ARATH1.388e-2543.24Serine/threonine-protein phosphatase PP1 isozyme 6... [more]
PP11_ARATH1.388e-2543.24Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1B_XENTR1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_XENLA1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RAT1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RABIT1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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