BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_PONAB (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Pongo abelii GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_PIG (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Sus scrofa GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_MOUSE (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_HUMAN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_CHICK (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Gallus gallus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_BOVIN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Bos taurus GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.813e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRFN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.092e-25
Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AA+I++KI CMHGG+   + +++QI  + RP T+     +L DLLW+DP +N  ++G   N RG    TFG D V  F   +DL L+ RAH+ V DG+E FA+  L+TLFS P
Sbjct:  127 NRIYGFYDECKRRYNSK----LWKAFTDCFNCLPVAAIIDEKIFCMHGGLSPDLKNMDQIRRITRP-TVVPDFGLLCDLLWADPDKN--IQGWEDNDRGVSY-TFGADVVESFLKKHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAP 266
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: GLC7B_CAEEL (Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis elegans GN=gsp-2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA+I++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFGP+ V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VTGWGENDRGVSF-TFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: GLC7B_CAEBR (Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis briggsae GN=gsp-2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA+I++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFGP+ V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VTGWGENDRGVSF-TFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 269
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.997e-25
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AA+I++KI C HGG+   +  +EQI  L RP  +    + L DLLWSDP ++  V+G   N RG    TFG D V +F N ++L LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  130 NRIYGFYDECKRRYNVK----LWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAP 269
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP1B_PONAB1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PIG1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_MOUSE1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_HUMAN1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_CHICK1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_BOVIN1.813e-2543.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1_DICDI3.092e-2541.89Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
GLC7B_CAEEL6.889e-2543.24Serine/threonine-protein phosphatase PP1-beta OS=C... [more]
GLC7B_CAEBR6.889e-2543.24Serine/threonine-protein phosphatase PP1-beta OS=C... [more]
PP1B_DROME8.997e-2543.24Serine/threonine-protein phosphatase beta isoform ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
back to top