BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1A_BOVIN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.618e-24
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V+G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VQGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 3.419e-24
Identity = 64/148 (43.24%), Postives = 84/148 (56.76%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   +     W      FN LP+AALI+++I CMHGG+   +  + QI +++RP  +    + L DLLWSDP ++  V G  PN RG    TFG D V  F    DL LI RAH+ V DGFE FA   L+T+FS P
Sbjct:  127 NRIYGFYDECKRRFSVK----IWRIFTDCFNCLPVAALIDERIFCMHGGLSPELLSLRQIRDIRRPTDIPDRGL-LCDLLWSDPDKD--VRGWGPNDRGVSY-TFGSDIVSGFLKRLDLDLICRAHQVVEDGFEFFANKQLVTIFSAP 266
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.616e-24
Identity = 63/148 (42.57%), Postives = 83/148 (56.08%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF   C  R   R     W      FN LP  AL+++KIICMHGG+   +  ++ I ++ RP  +    + L DLLWSDP ++  V G   N RG    TFGPD V  F   +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  128 NRIYGFYDVCKRRYNIR----LWKTFTDCFNCLPACALVDEKIICMHGGLSPELKSLDAIRHIPRPTDVPDTGL-LCDLLWSDPDKD--VAGWGENDRGVSY-TFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 267
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1G_BOVIN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Bos taurus GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1GB_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit B OS=Xenopus laevis GN=ppp1cc-B PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
[Close]
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP1GA_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A OS=Xenopus laevis GN=ppp1cc-A PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 9.947e-24
Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R      I  W      FN LP+AA++++KI C HGG+   +  +EQI  + RP  +    + L DLLWSDP ++  V G   N RG    TFG + V +F + +DL LI RAH+ V DG+E FA+  L+TLFS P
Sbjct:  131 NRIYGFYDECKRRYN----IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKD--VLGWGENDRGVSF-TFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP1A_BOVIN2.618e-2441.89Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP17_ARATH3.419e-2443.24Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP12_ACECL7.616e-2442.57Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PPIG_XENTR9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_RAT9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_BOVIN9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GB_XENLA9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GA_XENLA9.947e-2441.89Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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