BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: YT91_CAEEL (Putative serine/threonine-protein phosphatase C06A1.3 OS=Caenorhabditis elegans GN=C06A1.3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.035e-21
Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPI-TMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF +EC  + G    I  W      FN +P++ LI K+++CMHGG+   + +++ I N+ RP   ++ G  +L+DLLWSDPT     EG   + RG   + FG   V + C + ++ LI+RAH+ V DG+E      LIT+FS P
Sbjct:  160 NKIYGFYVECQYKYG----IGLWWDFQSCFNRMPMSGLISKRVLCMHGGLSPELINLDTIRNIPRPCEPLDRG--LLIDLLWSDPTNKG--EGWFHSIRGISYM-FGKGVVEQACKSLEIDLIIRAHQVVQDGYEMMTGRRLITVFSVP 299          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP4C2_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 2 OS=Caenorhabditis elegans GN=pph-4.2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 7.882e-21
Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G       W     +F++L LAA+I+ K+ C+HGG+  SI  ++QI  L R I +      + DLLWSDP E  S  G+ P  RG G + FG D    FC NND   I RAH+ VM+G++   +  ++T++S P
Sbjct:  133 VYGFYDECVRKYGSGQ---VWKHCTEIFDYLSLAAVIDGKLFCVHGGLSPSIATLDQIRVLDRKIEVPHEG-PMCDLLWSDPEEGCSGWGISP--RGAGYL-FGGDAAELFCENNDFLRICRAHQLVMEGYKLHFRKRVVTVWSAP 271          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A2_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 2 OS=Paramecium tetraurelia GN=Ppn2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20
Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  + G       W +   +F +LPL+A++E++I C HGG+  ++  V+QI+ L R   +    + + DLLWSDP E  +  G+ P  RG G  T+G D   +F ++N L+ I RAH+ VM+G ++      IT+FS P
Sbjct:  129 NKIYGFYDECFRKYGNEI---VWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNRVQDIPHEGL-MCDLLWSDPEETKNGWGISP--RGAGW-TWGCDITEKFLHSNKLKQIARAHQLVMEGIQKVHNQKTITIFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A1_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia GN=Ppn1 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20
Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  + G       W +   +F +LPL+A++E++I C HGG+  ++  V+QI+ L R   +    + + DLLWSDP E  +  G+ P  RG G  T+G D   +F ++N L+ I RAH+ VM+G ++      IT+FS P
Sbjct:  129 NKIYGFYDECFRKYGNEI---VWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNRVQDIPHEGL-MCDLLWSDPEETKNGWGISP--RGAGW-TWGCDITEKFLHSNKLKQIARAHQLVMEGIQKVHNQKTITIFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A3_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 3 OS=Paramecium tetraurelia GN=Ppn3 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.344e-20
Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  + G       W +   +F +LPL+A++E++I C HGG+  ++  V+QI+ L R   +    + + DLLWSDP E  +  G+ P  RG G  T+G D   +F ++N L+ I RAH+ VM+G ++      IT+FS P
Sbjct:  129 NKVYGFYDECFRKYGNEI---VWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNRVQDIPHEGL-MCDLLWSDPEETKNGWGISP--RGAGW-TWGCDITEKFLHSNKLKQIARAHQLVMEGIQKVHNQKTITIFSAP 269          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.344e-20
Identity = 55/146 (37.67%), Postives = 83/146 (56.85%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++ P+ AL++ KI C+HGG+   I  ++Q+ +L R I        + DLLWSDP +     G+ P  RG G  TFG D   +F + NDL LI RAH+ VM+G+    Q +++T+FS P
Sbjct:  194 VYGFYDECLRKYGSAN---VWKMFTDLFDYFPVTALVDNKIFCLHGGLSPMIETIDQVRDLNR-IQEVPHEGPMCDLLWSDPDDRGGW-GISP--RGAGF-TFGQDISEQFNHTNDLSLIARAHQLVMEGYSWSHQQNVVTIFSAP 331          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.756e-20
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++ P+ AL++ KI C+HGG+   I  ++Q+  L R I        + DLLWSDP +     G+ P  RG G  TFG D   +F + NDL LI RAH+ VM+G+    Q +++T+FS P
Sbjct:  186 VYGFYDECLRKYGSAN---VWKMFTDLFDYFPITALVDNKIFCLHGGLSPMIETIDQVRELNR-IQEVPHEGPMCDLLWSDPDDRGGW-GISP--RGAGF-TFGQDVSEQFNHTNDLSLIARAHQLVMEGYAWSHQQNVVTIFSAP 323          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.293e-20
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++LPL ALIE ++ C+HGG+  S++ ++ I +L R I        + DLLWSDP +     G+ P   G    TFG D   +F +NN L LI RAH+ VM+GF      +++T+FS P
Sbjct:  123 VYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRSLDR-IQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDIAAQFNHNNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAP 260          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.995e-20
Identity = 52/146 (35.62%), Postives = 86/146 (58.90%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G    +  W     +F++L L+AL++ KI C+HGG+  SIN ++QI  + R   +      + DL+WSDP   + + G   + RG G + FG D V +F ++N+L+ I RAH+ VM+GF+      L+T++S P
Sbjct:  121 VYGFYEECVRKYGS---VTVWKYCTEIFDYLSLSALVDGKIFCVHGGLSPSINTLDQIRAIDRKQEVPHEG-PMCDLMWSDP---EDIPGWNGSPRGAGFL-FGEDVVQKFNHDNNLEFICRAHQLVMEGFKYMFNETLVTVWSAP 258          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A1_ARATH (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.995e-20
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++LPL ALIE ++ C+HGG+  S++ ++ I +L R I        + DLLWSDP +     G+ P   G    TFG D   +F +NN L LI RAH+ VM+G+    + +++T+FS P
Sbjct:  123 VYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRSLDR-IQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDIATQFNHNNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAP 260          
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
YT91_CAEEL6.035e-2137.58Putative serine/threonine-protein phosphatase C06A... [more]
PP4C2_CAEEL7.882e-2138.36Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A2_PARTE1.029e-2036.49Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_PARTE1.029e-2036.49Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A3_PARTE1.344e-2036.49Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_YEAST1.344e-2037.67Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A1_YEAST1.756e-2037.67Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A2_ARATH2.293e-2037.67Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP4C_DICDI2.995e-2035.62Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A1_ARATH2.995e-2036.99Serine/threonine-protein phosphatase PP2A-1 cataly... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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