BQ623964

Overview
NameBQ623964
Unique NameBQ623964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.138e-19
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++ PL AL+E +I C+HGG+  SI  ++ I N  R +        + DLLWSDP +     G+ P   G    TFG D   +F + N+L+LI RAH+ VM+GF    +  ++T+FS P
Sbjct:  124 VYGFYDECLRKYGNAN---VWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR-VQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAP 261          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.486e-19
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G       W     +F++L LAA+I+ K+ C+HGG+  SI+ ++QI  + R   +      + DLLWSDP E +   GL P  RG G + FG D    FC  N + LI RAH+ VM+G++      ++T++S P
Sbjct:  148 VYGFYDECLRKYGNAS---VWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDG-PMCDLLWSDPEEGNVGWGLSP--RGAGYL-FGADASKTFCETNGVDLICRAHQLVMEGYKWHFNEKVLTVWSAP 286          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.486e-19
Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++LPL AL+E +I C+HGG+  SI  ++ I N  R   +  G   + DLLWSDP +     G+ P   G    TFG D   +F ++N L+LI RAH+ VMDG+    +    T+FS P
Sbjct:  126 VYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHGG-PMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDISNQFNHSNSLKLISRAHQLVMDGYNWAHEAKGGTIFSAP 263          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.486e-19
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++ PL AL+E +I C+HGG+  SI  ++ I N  R +        + DLLWSDP +     G+ P   G    TFG D   +F + N+L+LI RAH+ VMDG+    +  ++T+FS P
Sbjct:  130 VYGFYDECLRKYGNAN---VWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR-VQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDISEQFNHTNNLKLIARAHQLVMDGYNWAHEQKVVTIFSAP 267          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP12_TRYBB (Serine/threonine-protein phosphatase PP1(5.9) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.486e-19
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W +    FN +P+A L+E +I+CMHGG+   +  ++QI  + RP T    S ++ DLLWSDP+ N        N RG    TF    V  F    DL LI RAH+ V  G+E FA   L+T+FS P
Sbjct:  169 NRIYGFFDECKRRYSVR----LWKQFTDTFNCMPVAGLVEGRILCMHGGLSPELTDLDQIRRILRP-TDVPDSGLICDLLWSDPSTN-MESNWSENDRGVSW-TFSESVVKSFNKKFDLDLICRAHQVVDAGYEFFAARQLVTVFSAP 309          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP11_TRYBB (Serine/threonine-protein phosphatase PP1(4.8) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.486e-19
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 NALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            N ++GF  EC  R   R     W +    FN +P+A L+E +I+CMHGG+   +  ++QI  + RP T    S ++ DLLWSDP+ N        N RG    TF    V  F    DL LI RAH+ V  G+E FA   L+T+FS P
Sbjct:  169 NRIYGFFDECKRRYSVR----LWKQFTDTFNCMPVAGLVEGRILCMHGGLSPELTDLDQIRRILRP-TDVPDSGLICDLLWSDPSTN-MESNWSENDRGVSW-TFSESVVKSFNKKFDLDLICRAHQVVDAGYEFFAARQLVTVFSAP 309          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.941e-19
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++LPL ALIE ++ C+HGG+  S++ ++ I  L R I        + DLLWSDP +     G+ P   G    TFG D   +F + N L LI RAH+ VM+GF      +++T+FS P
Sbjct:  124 VYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDIAQQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAP 261          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSI (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.941e-19
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++LPL ALIE ++ C+HGG+  S++ ++ I  L R I        + DLLWSDP +     G+ P   G    TFG D   +F + N L LI RAH+ VM+GF      +++T+FS P
Sbjct:  124 VYGFYDECLRKYGNAN---VWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTLDNIRALDR-IQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDIAQQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAP 261          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.535e-19
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G       W     +F++L LAA+I+ K+ C+HGG+  SI+ ++QI  + R   +      + DLLWSDP E +   GL P  RG G + FG D    FC  N + LI RAH+ VM+G++      ++T++S P
Sbjct:  148 VYGFYDECMRKYGNAS---VWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDG-PMCDLLWSDPEEGNVGWGLSP--RGAGYL-FGADASKTFCEANSVDLICRAHQLVMEGYKWHFNEKVLTVWSAP 286          
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.535e-19
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 1
Query:    7 LFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSGP 444
            ++GF  EC+ + G  +    W     LF++ PL AL+E +I C+HGG+  SI++++ + +L R +        + DLLWSDP +     G+ P   G    TFG D   +F ++N+L+L+ RAH+ VM+G+    +  ++T+FS P
Sbjct:  132 VYGFYDECLRKYGSAN---VWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNLDSVRSLDR-VQEVPHEGPMCDLLWSDPDDRCG-WGISPRGAG---YTFGQDISEQFNHSNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAP 269          
The following BLAST results are available for this feature:
BLAST of BQ623964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PP2A2_ORYSI1.138e-1936.30Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP4C1_CAEEL1.486e-1936.30Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_BRANA1.486e-1937.67Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ARATH1.486e-1936.30Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP12_TRYBB1.486e-1939.19Serine/threonine-protein phosphatase PP1(5.9) OS=T... [more]
PP11_TRYBB1.486e-1939.19Serine/threonine-protein phosphatase PP1(4.8) OS=T... [more]
PP2A3_ORYSJ1.941e-1936.99Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A3_ORYSI1.941e-1936.99Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP4C1_CAEBR2.535e-1936.30Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A4_ORYSI2.535e-1934.25Putative serine/threonine-protein phosphatase PP2A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623964 ID=BQ623964; Name=BQ623964; organism=Citrus sinensis; type=EST; length=459bp
AATGCCCTTTTTGGCTTCCGGATTGAGTGCATTGAGCGTATGGGTGAGAG
AGATGGAATTTGGGCATGGCATAGGATAAACCGTTTGTTCAATTGGCTTC
CCTTGGCAGCTCTAATTGAAAAGAAAATCATCTGTATGCATGGTGGTATT
GGTCGGTCAATAAATCACGTTGAACAGATTGAGAATCTTCAGCGTCCAAT
TACCATGGAAGCAGGCTCCATTGTGCTTATGGATTTATTATGGTCTGATC
CAACAGAAAATGATAGTGTCGAAGGATTACGACCAAATGCCAGAGGTCCG
GGCTTGGTTACTTTCGGGCCTGATCGAGTTATGGAATTTTGCAACAACAA
TGATCTTCAGTTGATTGTACGTGCACATGAATGTGTAATGGATGGCTTTG
AGCGTTTTGCCCAGGGACATTTAATTACACTTTTCTCGGGTCCAATTACT
GTGGTACAG
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