BQ623969

Overview
NameBQ623969
Unique NameBQ623969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.384e-71
Identity = 136/198 (68.69%), Postives = 152/198 (76.77%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL GA+  PKRP AAIVGGSKVSSKIGV+E+L++ CD +L+GGGMIFTFYKA+G+SVG SLVEE                GV LLLP+DVV+AD FAP ANS+ V   AIPDGWMGLDIGPDS+  F +AL   +TVIWNGPMGVFEFDKFA GT AIA  LADLSGKG  TIIGGGDSVAAVEK G+A  MSHI
Sbjct:  179 ELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.066e-71
Identity = 136/198 (68.69%), Postives = 154/198 (77.78%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYL GAVS+PKRPF AIVGGSKVSSKI VIE L+E CD +++GGGMIFTFYKA+G+ VGSSLVEE                GV LLLPSDVV+ADKF  +AN++ V   AIPDGWMGLDIGPDS+KTF +AL   KTV+WNGPMGVFEF KFAVGT AIA  L++L+ KG  TIIGGGDSVAAVE+ GVA  MSHI
Sbjct:  240 ELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFAVGTVAIANTLSELTPKGAITIIGGGDSVAAVEQAGVAEKMSHI 437
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 5.310e-71
Identity = 135/198 (68.18%), Postives = 153/198 (77.27%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL+YL  A+ +P+RP AAI+GGSKVSSKIGVIE+LLE CD LL+GGGMIFTFYKA+G+SVG SLVEE                GV  LLP+DVV+ADKF  DA S++V    IPDGWMGLDIGP+SVK F EAL   K+V+WNGPMGVFEFDKFA GT+AIA  LADL+  G TTIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  180 ELNYLQAAIETPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQEALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHI 377
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.635e-70
Identity = 137/198 (69.19%), Postives = 152/198 (76.77%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL+YL  A+ +P+RP AAI+GGSKVSSKIGVIE+LLE CD LL+GGGMIFTFYKA+G+SVG SLVEE                GV LLLP+DVV+AD F  +AN K V    IPDGWMGLDIGPDSVK F +AL   K+VIWNGPMGVFEFDKFA GTEAIA  L  L+GKG TTIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  179 ELNYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 3.442e-70
Identity = 134/198 (67.68%), Postives = 154/198 (77.78%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL+YL  A+ +P+RP  AI+GGSKVSSKIGVIE+LLE CD L++GGGMIFTFYKA+G++VG SLVE+                GV+ LLP+DVV+AD FAPDAN+K V   AI DGWMGLDIGP+SVK F  AL   K+VIWNGPMGVFEFDKFA GTEAIA  LA+L+GKG  TIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  178 ELNYLQAAIENPQRPLVAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEDDKLELAKSLEAKAKEKGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGLDIGPESVKVFQAALADCKSVIWNGPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHI 375
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 7.668e-70
Identity = 138/198 (69.70%), Postives = 154/198 (77.78%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL+YL  A+  P+RP AAIVGGSKVSSKIGVIE+LLE  D LL+GGGMIFTFYKA+G++VG SLVEE                GV LLLP+DVV+AD FA DANS+VV   AIPD WMGLDIGP SVK F EAL   KTVIWNGPMGVFEFD+FA GTEAIA+ LA+L+ +GV TIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  178 ELEYLQNAIEHPRRPLAAIVGGSKVSSKIGVIEALLEKVDKLLIGGGMIFTFYKARGLNVGKSLVEEDKLELAKHLETKAQEKGVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHI 375
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.308e-69
Identity = 132/198 (66.67%), Postives = 154/198 (77.78%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL GA+ SPKRP AAIVGGSKVSSKIGV+ESL++ CD +L+GGGMIFTFYKA+G+SVG SLVE+                GV LLLP+DVV+AD F+PDANS++    +IP+GWMGLDIGPDSVK F +AL+  +TVIWNGPMGVFEFDKFA GT +IA  L+ LS KG  TIIGGGDSVAAVEK G+A  MSHI
Sbjct:  179 ELQYLQGAIDSPKRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLELAKALEEKAKSKGVELLLPTDVVLADNFSPDANSQIAQINSIPEGWMGLDIGPDSVKLFQDALEDCQTVIWNGPMGVFEFDKFANGTNSIATTLSVLSQKGCCTIIGGGDSVAAVEKAGLADKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.491e-69
Identity = 137/198 (69.19%), Postives = 149/198 (75.25%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L GA+ +PKRP  AIVGGSKVSSKIGVIE+LLE CD LL+GGGMIFTFYKAQG SVG SLVE+                   +LLP+DV++ADKFAPDA +K V   AIPDGWMGLDIG DSVK F EALD   T IWNGPMGVFEFDKFAVGTEAIAK LA  +  G  TIIGGGDSVAAVEKVGVA  MSHI
Sbjct:  179 ELQFLKGAIEAPKRPLVAIVGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKAQGKSVGGSLVEDDKIDLAKSLMEKAQG---KILLPTDVIVADKFAPDAEAKTVSVDAIPDGWMGLDIGADSVKVFQEALDGCGTAIWNGPMGVFEFDKFAVGTEAIAKTLAGATETGTVTIIGGGDSVAAVEKVGVADKMSHI 373
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.889e-68
Identity = 131/198 (66.16%), Postives = 154/198 (77.78%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL GA+ SP+RP AAIVGGSKVSSKIGV+ESL++ CD +L+GGGMIFTFYKA+G+SVG SLVE+                GV LLLPSDVV+AD F+PDA+S++V   +IP+GWMGLDIG +SVK F +AL   KTVIWNGPMGVFEFDKFA GT +I+  LA+LS KG  TIIGGGDSVAAVEK G+A  MSHI
Sbjct:  179 ELKYLQGAIDSPQRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLDLARALEKKAKEKGVQLLLPSDVVLADNFSPDASSQMVQIDSIPEGWMGLDIGKESVKLFQDALADCKTVIWNGPMGVFEFDKFANGTNSISTTLAELSAKGCCTIIGGGDSVAAVEKAGLASKMSHI 376
[Close]
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 3.221e-68
Identity = 132/198 (66.67%), Postives = 152/198 (76.77%), Query Frame = 2 
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            ELDYL GAVS+PKRPF AIVGGSKVSSKI VIE+L+E CD +++GGGMIFTFYKA+ + VGSSLVE+                GV LLLP+DVV+ADKF  +AN++ VP TAIPDGWMGLDIGPDSVKTFN+AL   KTV+WNGPMGVFEF +    T +IA  LA L+ KG  TIIGGGDSVAAVE+ GVA  MSHI
Sbjct:  239 ELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKIIIGGGMIFTFYKARALKVGSSLVEDDKIELAKKLEEMAKAKGVQLLLPTDVVVADKFDANANTQTVPITAIPDGWMGLDIGPDSVKTFNDALADAKTVVWNGPMGVFEFPQVRQRTVSIANTLAGLTPKGCITIIGGGDSVAAVEQAGVAEKMSHI 436
The following BLAST results are available for this feature:
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMM2.384e-7168.69Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGKH_VOLCA4.066e-7168.69Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_MICAN5.310e-7168.18Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_CYAP72.635e-7069.19Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CYAP83.442e-7067.68Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_THEEB7.668e-7069.70Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_PROM41.308e-6966.67Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP26.491e-6969.19Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMA1.889e-6866.16Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGKH_CHLRE3.221e-6866.67Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_01060 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01060 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623969 ID=BQ623969; Name=BQ623969; organism=Citrus sinensis; type=EST; length=596bp
GGAACTGGACTACCTTGTTGGGGCGGTTTCAAGCCCAAAGAGGCCATTTG
CTGCCATTGTGGGCGGTTCAAAGGTCTCATCCAAGATTGGAGTTATTGAG
TCACTCCTAGAAACATGTGATATCCTACTCCTTGGTGGAGGAATGATCTT
CACATTTTACAAGGCACAAGGAATCTCAGTGGGTTCATCTCTCGTTGAGG
AGGATAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAA
GGTGTTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGC
TCCTGACGCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCT
GGATGGGATTGGATATTGGACCAGATTCTGTTAAGACATTCAACGAAGCT
TTAGATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGA
GTTTGACAAGTTCGCTGTTGGAACAGAGGCAATCGCAAAGAAGCTAGCAG
ACCTCAGTGGCAAGGGCGTAACAACAATCATTGGAGGTGGAGACTCTGTA
GCCGCCGTTGAAAAAGTTGGAGTTGCCCGTGTCATGAGCCACATAT
back to top