BQ623969

Overview
NameBQ623969
Unique NameBQ623969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.713e-49
Identity = 103/198 (52.02%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  V     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.713e-49
Identity = 103/198 (52.02%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  V     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.713e-49
Identity = 103/198 (52.02%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  V     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_NOCFA (Phosphoglycerate kinase OS=Nocardia farcinica GN=pgk PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 98/191 (51.31%), Postives = 124/191 (64.92%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGV 574
            E+D L     + +RP+A ++GGSKVS K+ VIE+L    D L++GGGM FTF  AQG+SVGSSL++E                   + LP DVV+AD F+ DA SK VPA  IPDGWMGLDIG +SV  F   L   KTV WNGPMGVFEF+KFA GT  +A+ +   +GKG  T++GGGDS AAV  +G+
Sbjct:  185 EVDVLAKLTDNTERPYAVVLGGSKVSDKLAVIEALAPKVDTLVIGGGMCFTFLAAQGLSVGSSLLQEEMIDTCKGLLERYADV---IHLPRDVVVADSFSADAESKCVPANEIPDGWMGLDIGAESVDRFAALLTEAKTVFWNGPMGVFEFEKFAAGTRGVAEAIVAATGKGAFTVVGGGDSAAAVRALGL 372          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  +     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 103/198 (52.02%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  V     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDNMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL +L  AV  P+RPF AI+GG+KVS KI VI +LL+  D L++GGGM +TF KAQG ++G+SLVEE                GVNLLLP D V+ADKF  DA+  +     I +G+MGLDIGP + K +++A+ + KTV+WNGPMGVFEF  FA GT  +AK +AD       TIIGGGDS AAV  +G    M+HI
Sbjct:  179 ELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL+ L  A+S+P RPF AI+GG+KV  KIGVIESLL+  D L++GGG+ +TF KA G  VG SL+EE                GVN L+P+DV++AD F+ DAN+ +VP + IP     LDIG ++ + + + +  +K V+WNGPMGVFE D FA GT+AIA+ LA+   K   ++IGGGDS AAVEK G+A  MSHI
Sbjct:  174 ELEVLGKAISNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKVDLAKSFMDRAKEKGVNFLIPTDVLVADDFSNDANTSIVPISEIPSDLEALDIGTETREKYADVIKNSKLVVWNGPMGVFEIDAFAKGTKAIAEALAE--AKDTYSVIGGGDSAAAVEKFGLADQMSHI 369          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_PELLD (Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.745e-49
Identity = 99/198 (50.00%), Postives = 129/198 (65.15%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            EL YL  A+ SP+RPF AI+GGSK+S KI VI++L    D +L+GG M+FTF+KAQG+  G SLVE+                GV L+LP DV+ A + +PDA    V    + +  MG+DIGP + +T+ + +   KTV+WNGPMGVFE D FA GT A+A+ LA  + KG TTIIGGGDS AAV K G+A  M+HI
Sbjct:  176 ELMYLGKALQSPERPFVAILGGSKISGKIDVIDNLFSKVDTVLVGGAMVFTFFKAQGLETGRSLVEDNKTELALELLAKAKSMGVRLILPEDVMAAPEISPDAPFHAVSVDQLAENEMGVDIGPKTAETYRKEILGAKTVLWNGPMGVFEIDNFAGGTIAVAEALAAATAKGATTIIGGGDSAAAVAKAGLADKMTHI 373          
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.745e-49
Identity = 101/198 (51.01%), Postives = 130/198 (65.66%), Query Frame = 2
Query:    2 ELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLETCDILLLGGGMIFTFYKAQGISVGSSLVEEXXXXXXXXXXXXXXXXGVNLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVARVMSHI 595
            E+ +   A++ P RP AAI+GG+KVS K+ V+E+L+   DI+++GGGM FTF KA+G+SVG SLVE+                G+  LLP D V+AD+FA DA+ K V    IP  WM LD+GP S   F++AL    TVIWNGPMGVFE D+FA GT AIA  +A L  K  TTIIGGGD+ +AV K GVA  +S+I
Sbjct:  177 EMTFFEKAMTRPVRPLAAILGGAKVSGKLEVLETLVGKVDIIIIGGGMAFTFLKARGLSVGKSLVEDDLIDTAKRILDNAAKRGIEFLLPEDCVVADRFAADADCKTVSVNDIPSEWMALDVGPASTARFSDALKEANTVIWNGPMGVFEMDRFAKGTFAIADVVAGL--KNATTIIGGGDTDSAVRKAGVADKVSYI 372          
The following BLAST results are available for this feature:
BLAST of BQ623969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOBL5.713e-4952.02Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK5.713e-4952.02Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ5.713e-4952.02Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_NOCFA7.461e-4951.31Phosphoglycerate kinase OS=Nocardia farcinica GN=p... [more]
PGK_CLOBH7.461e-4951.52Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB67.461e-4952.02Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB17.461e-4951.52Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_BACP27.461e-4950.51Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_PELLD9.745e-4950.00Phosphoglycerate kinase OS=Pelodictyon luteolum (s... [more]
PGK_GEOSF9.745e-4951.01Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01060 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01060 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623969 ID=BQ623969; Name=BQ623969; organism=Citrus sinensis; type=EST; length=596bp
GGAACTGGACTACCTTGTTGGGGCGGTTTCAAGCCCAAAGAGGCCATTTG
CTGCCATTGTGGGCGGTTCAAAGGTCTCATCCAAGATTGGAGTTATTGAG
TCACTCCTAGAAACATGTGATATCCTACTCCTTGGTGGAGGAATGATCTT
CACATTTTACAAGGCACAAGGAATCTCAGTGGGTTCATCTCTCGTTGAGG
AGGATAAGCTTGACCTTGCTACAACACTTCTTGCAAAGGCCAAGGCTAAA
GGTGTTAATCTTTTGTTACCCTCTGATGTGGTAATTGCTGACAAATTTGC
TCCTGACGCAAACAGCAAGGTTGTGCCAGCAACTGCCATTCCTGATGGCT
GGATGGGATTGGATATTGGACCAGATTCTGTTAAGACATTCAACGAAGCT
TTAGATACTACCAAAACTGTCATCTGGAATGGCCCAATGGGAGTGTTTGA
GTTTGACAAGTTCGCTGTTGGAACAGAGGCAATCGCAAAGAAGCTAGCAG
ACCTCAGTGGCAAGGGCGTAACAACAATCATTGGAGGTGGAGACTCTGTA
GCCGCCGTTGAAAAAGTTGGAGTTGCCCGTGTCATGAGCCACATAT
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