BQ623976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 71/200 (35.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y G D ++ + K+KE+KNGRLAM + Sbjct: 23 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEA--VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR----VGGGPLGE----GLDKIYPG-----------GAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 195
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 69/199 (34.67%), Postives = 94/199 (47.24%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E R + Y G LG D ++ + K+KE+KNGRLAM + Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLG------------------LADDPEAFAELKVKEIKNGRLAMFS 222
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 71/200 (35.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y G D ++ + K+KE+KNGRLAM + Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR----VGGGPLGE----GLDKIYPG-----------GAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 223
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 67/199 (33.67%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G DRP + S Q SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G + D + + K+KE+KNGRLAM + Sbjct: 51 GPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR----VGGGPLGE--------------GLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFS 223
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 65/196 (33.16%), Postives = 90/196 (45.92%), Query Frame = 1 Query: 145 YLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPY---TLFVLEMALMGFAEHRRFQD----------WANPGSMGRQYF---LGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLASWVTLFK 681 +LDGSLPGD+GFDPLGL DP F+ KW E+I+GR+AML +G +G+A T + WF+ G P A P+ TL ++ LMG+ E +R+ D WA P S + F G + Y G D ++ KL E+K+ RLAMLA + F+ Sbjct: 75 WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGIF----VGQAW-----TGIPWFEAGADPGA------VAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGG-KFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFE 248
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 74/233 (31.76%), Postives = 107/233 (45.92%), Query Frame = 1 Query: 19 DQLNPQLGHQEKVPLLLGQPSTPP---VKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQ----YFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 ++L+ ++G E ++ S P + G+DRPL+ S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L K G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G Y G LG D ++ + K+KE+KNGRLAM + Sbjct: 21 NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVTPELLAKNGVKFGEA--VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG----GPLGEVEDPIYPGGSFDPLG------------------LADDPEAFAELKVKELKNGRLAMFS 223
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12 Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 145 YLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQD----------WANPGSMGRQYFLGFEKYLGRIPA--IRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLASWVTLFK 681 +LDGSLPGDYGFDPLGL DP F+ KW E+I+GR+AM +G +G+A + + WF+ G P A +++ TL ++ LMG+ E +R+ D WA P S + F F G D + ++ K+ E+K+ RLAMLA + F+ Sbjct: 70 WLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGIF----VGQAW-----SGIPWFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFE 243
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 65/199 (32.66%), Postives = 92/199 (46.23%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G DR + S Q+ SYL+G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G I PE+L K + + + WF+ G I G +Y +P + ++ LMG E R G G + G + + D + + K+KE+KNGRLAM + Sbjct: 49 GPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGE-GNDLYPGGQYF----------------DPLGLADDPTTFAELKVKEIKNGRLAMFS 223
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 58/182 (31.87%), Postives = 79/182 (43.41%), Query Frame = 1 Query: 118 WFASKQSLSYLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 W + SYLDGS PGD+GFD LGL + P + E E+I+ R+AML G I PE LG + + A G G W T+ +E + F EH+R + S ++Y G LG KD ++ K+KE+KNGRLA+LA Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE------SELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAA-IPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSME---KDSEKKKYPGGAFDPLG------------------YSKDPAKFEELKVKEIKNGRLALLA 202
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12 Identity = 65/185 (35.14%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 145 YLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWAD--PYTL---FVLEMALMGFAEHRR------FQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 YL+G + GDYG+DP GL PE K+ A+ E+I+ R+AMLGA G I PE L K G A+ WF+TG + G T NY+ P L V E+ L+G AE+ R F+D +PG KD + K+KE+KNGRLAM A Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIPEALNKYGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGG--------------------------PFDPLGLAKDPEQGALLKVKEIKNGRLAMFA 235 The following BLAST results are available for this feature:
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623976 ID=BQ623976; Name=BQ623976; organism=Citrus sinensis; type=EST; length=685bpback to top |