BQ623976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12 Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 145 YLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQ----------DWANPGSMGRQYFLGF---EKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLASWVTLFK 681 +LDGSLPGD+GFDPLGL DP F+ KW E+I+GR+AM +G +G+A + + WF+ G P A +++ +L ++ LMG+ E +R+ DWA P S + F F + Y G D + ++ KL E+K+ RLAMLA + F+ Sbjct: 70 WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGG-KFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFE 243
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 66/200 (33.00%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G DR + S Q+ SYL+G PGDYG+D GLS DPE F + L EVI+GR+AMLGA+G + PE+L K G+ +E WF+ G I G +Y +P + ++ LMG E R G G + G + + D + + K+KE+KNGRLAM + Sbjct: 52 GPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FARNRAL---EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGE-GNDLYPGGQYF----------------DPLGLADDPVTFAELKVKEIKNGRLAMFS 226
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 64/199 (32.16%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 100 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGRIPAIRXXXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLA 660 G+DR + S + SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R A G +G L + D ++ + K+KE+KNGRLAM + Sbjct: 51 GSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGEGPLGEAEDLLY--------------PGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFS 224 The following BLAST results are available for this feature:
BLAST of BQ623976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623976 ID=BQ623976; Name=BQ623976; organism=Citrus sinensis; type=EST; length=685bpback to top |