BQ623981

Overview
NameBQ623981
Unique NameBQ623981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 69/185 (37.30%), Postives = 113/185 (61.08%), Query Frame = 1
Query:   82 SELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLE-TVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            ++L+  +Y Q+CP AE+I++  V Q      + A   +R  FHDC V+ CD S+L+  T +    E+ +  +  +R F ++  +K+ALE++CP  VSCADI+ L+ R+ IV +GGP   + TGRRD R+S  AE    IP    +  T +++F + G+D + +V L GAH++G  HC++  +RL+
Sbjct:   23 AQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLF 207          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 69/182 (37.91%), Postives = 111/182 (60.99%), Query Frame = 1
Query:   88 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            L+  +Y ++CPKAE I+K+ V +        A   +R  FHDC V+ C+ S+LLE +     E+ S  +  +R F+ +  +KAALE ECP  VSC+D++AL AR+ +V L GP   ++TGRRD  V+ + E    +P+  ++I++ ++ F S G+D + +V L G H++G  HC  + +RLY
Sbjct:   32 LKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLE-LKNKKDEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLY 212          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 69/188 (36.70%), Postives = 107/188 (56.91%), Query Frame = 1
Query:   73 SGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQ-ASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            S  ++L  N+Y+++CPK  + +K  V     K      S +R  FHDC V  CDAS+LL+  +    EQ A      +R    +  IK+ +E+ CP  VSCADI+A++AR+ +V+LGGP   +K GRRDS+ + L+     IP    S++  +S F + G+    +VAL GAH++G+  C +   R+Y
Sbjct:   22 SSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIY 209          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 68/182 (37.36%), Postives = 112/182 (61.54%), Query Frame = 1
Query:   88 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVA-SEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEV-EKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHR 627
            L ++YY ++CPK EEI++  +  ++     +  + +R +FHDC V+ CDAS+LLE +     +E  S ++FG+R    V +IK +LE ECP +VSC+D++ L+AR+ + + GGP I +  GR+DS  +    V +  +P     + T LS+F + G+  E  VA+ GAH++G  HC N++ R
Sbjct:   38 LSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSR 219          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  100 YYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGM-RNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            +Y QSCPKA+EI++  V + +        S +R  FHDC VK CDAS+LL++   + SE+ S  +    R F+ +  IK ALE ECP  VSCADI+AL+AR+  V+ GGP   +  GRRD+R + L+     IP  N++  T L+ F   G+D   +V+L G+H++G   C +   RLY
Sbjct:   37 FYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLY 215          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.239e-31
Identity = 75/188 (39.89%), Postives = 111/188 (59.04%), Query Frame = 1
Query:   67 FYSGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRL 630
            F    ++L+  +Y+QSCP+AE I++  V Q +        + +R  FHDC VK CDASLL+++     SE+ +  +  +R F  +  IKA LEA CP  VSCADIV L+ R+ + + GGP   I TGRRD RVS   +V   +P    S++ A+S+F + G++    VAL GAH+VG+ +C     R+
Sbjct:   17 FPIAFAQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNNLDVT--LPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRI 199          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.113e-31
Identity = 71/178 (39.89%), Postives = 105/178 (58.99%), Query Frame = 1
Query:  100 YYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASE-QASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRL 630
            +Y +SCP AEEI+K  +     K    A S +R  FHDC V  CDAS+LL+T   + SE QA+     +R F+ +  IK  LE  CPL VSC+DI+AL+AR+ + + GGP   +  GRRDS  +  A   +FIP  N S+ + +  F   G++ + ++AL GAH++G+  C +   R+
Sbjct:   34 FYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.760e-31
Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = 1
Query:   82 SELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQ-ASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            ++L  N+Y+ SCP     ++  V            S +R  FHDC V  CD S+LL+  +    EQ A+      R F  +  IK+A+E  CP  VSCADI+A++AR+ +V LGGP   +K GRRD+R +  A     IP    S++  +S F+++G+    +VAL GAH++G+  C N   R+Y
Sbjct:   28 AQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIY 212          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.605e-31
Identity = 72/180 (40.00%), Postives = 106/180 (58.89%), Query Frame = 1
Query:   97 NYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASE-RSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            ++Y  SCP+AEEI++  V + + +    A S +R  FHDC V+ CD SLLL+T   + +E+ S   S   R F+ V  IKAALE ECP  VSCAD + L+AR+  V+ GGP   +  GRRDS  +  A+  K +P  ++   T    F++ G++   +VAL G+H++G   C +   RLY
Sbjct:   38 DFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLY 217          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.708e-31
Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 1
Query:   82 SELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQ-ASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            S L   +Y  SCP+A+EI+   + +   K    A S +R  FHDC V+ CDAS+LL+    + SE+ A      +R F+ +  IKA LE  CP  VSCADI+AL+AR   ++ GGP   +  GRRDSR + L      IP  N +I   L++F   G+++E +V+L G H++G   C     RLY
Sbjct:   43 SNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLY 227          
The following BLAST results are available for this feature:
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER39_ARATH2.496e-3237.30Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER56_ARATH3.261e-3237.91Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER4_VITVI4.258e-3236.70Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER29_ARATH4.258e-3237.36Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER72_ARATH7.264e-3241.34Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER57_ARATH1.239e-3139.89Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER20_ARATH2.113e-3139.89Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER52_ARATH2.760e-3136.76Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER14_ARATH3.605e-3140.00Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER9_ARATH4.708e-3139.46Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_01072 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01072 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623981 ID=BQ623981; Name=BQ623981; organism=Citrus sinensis; type=EST; length=637bp
ACTAAGAGGCTACGGTTTCATCTTTCCCCAAGTTTCTTCTTTCTGTTATT
ACCGTTGCTCTTGCAGTTTTATTCTGGAATGAGTGAGCTGCAGTTTAATT
ACTACGCACAGAGTTGCCCAAAAGCCGAAGAAATCATCAAGCAACAAGTC
GTTCAGCTATACTACAAACATGGAAACACTGCAGTCTCCTGGGTCAGAAA
TCTTTTCCACGATTGCGCCGTCAAGTCATGCGATGCATCGCTCTTGCTGG
AGACAGTGACAGGTGTTGCATCGGAGCAGGCATCGGAAAGAAGCTTTGGA
ATGAGAAATTTCAAGTACGTGAGCACAATCAAAGCAGCTCTTGAGGCTGA
ATGCCCCTTGAAAGTTTCTTGCGCCGATATCGTGGCCCTTTCTGCACGAG
AAGGCATTGTCATGTTGGGAGGCCCCCGTATCCCAATTAAAACTGGACGA
AGGGATAGCAGAGTGAGTTATTTGGCGGAGGTCGAAAAGTTCATCCCCAA
TCACAATGATAGCATAGCCACAGCCCTTTCCGTTTTTAATTCCATTGGCA
TCGATGATGAAGGAGTCGTTGCTCTTTATGGAGCTCATTCTGTAGGACGA
GTCCACTGCGCAAATCTCGTACACCGACTCTATCCCA
back to top