BQ623981

Overview
NameBQ623981
Unique NameBQ623981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.995e-22
Identity = 63/183 (34.43%), Postives = 93/183 (50.82%), Query Frame = 1
Query:   85 ELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANLVHRLY 633
            +L   +Y  SCP+A   IK  V            S +R  FHDC    CDAS+LL   TG+  + A      +R F  +  IK  LE+ C   VSCADI+ ++AR+ +V LGGP   +  GRRDS  +  +     +P  + S +   + F    ++   +VAL GAH++G+  C+N   R+Y
Sbjct:   24 QLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL---TGM-EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIY 200          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.162e-21
Identity = 62/173 (35.84%), Postives = 96/173 (55.49%), Query Frame = 1
Query:   88 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLE-TVTGVASEQASER-SFGMRNFKYVSTIKAALEAEC-PLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDS-RVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSV 594
            L F++Y +SCPKAE I++  V     +    A   +R  FHDC V+ CDAS+LL+ + TG   +QA    +     FK ++ I   L  EC    VSC+D++AL+AR+ +V+ GGP   +  GRRDS   +   +V   +P    ++   L+V + I +D   +VAL G H++
Sbjct:   41 LSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.589e-21
Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  100 YYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHC 609
            +Y   C   E I++  V          A   +R  FHDC V  CD S+LL    G  SE+ +  +  +R F+ +   KA LE  CP  VSCADI+ L+AR+ +V+ GG R  +  GR D R+S  ++V   +P  +DS+A     F +  ++   +V L G H++G   C
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTSERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVN--LPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGC 205          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.620e-17
Identity = 47/160 (29.38%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  136 IKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLL-ETVTGVASEQASERSFGMRNFKYVSTIKAALEAECP-LKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHC 609
            +K+ VV           S +R  FHDC V  CDA LLL +T T    + A+  +  +R F  +   K  ++ + P + VSCADI++++AR+      G    +  GR+D+R +        +   N+++ + L+ F + G +   +VAL G+H++G   C
Sbjct:   75 VKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARC 234          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.276e-16
Identity = 44/147 (29.93%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  187 SWVRNLFHDCAVKSCDASLLLETVTGV--ASEQASERSFGMRNFKYVSTIKAALEAECP-LKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANL 618
            S +R  FHDC V  CD  +LL+ + G     + +   +  +R F+ ++  K ++   CP + VSCADI+A++AR+ +  LGG    +  GR D+  +  +     +P  +D++   +  F+        +VAL GAH+VG   C+ +
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCSTV 248          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16
Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  187 SWVRNLFHDCAVKSCDASLLLETVTGV--ASEQASERSFGMRNFKYVSTIKAALEAECP-LKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANL 618
            S +R  FHDC V  CD  +LL+ + G     + +   +   R ++ ++  K ++   CP + VSCADI+A++AR+ +  LGG    +  GR D+R +        +P   D++   +  FN        +VAL GAH+VG   C+ +
Sbjct:  102 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCSTV 248          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15
Identity = 44/147 (29.93%), Postives = 76/147 (51.70%), Query Frame = 1
Query:  187 SWVRNLFHDCAVKSCDASLLLETVTGV--ASEQASERSFGMRNFKYVSTIKAALEAECP-LKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANL 618
            S +R  FHDC V  CD  +LL+ + G     + +   +   R ++ ++  K ++   CP + VSCADI+A++AR+ +  LGG    +  GR D+R +  +     +P   D++   +  F+        +VAL GAH+VG   C+ +
Sbjct:  103 SLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCSTV 249          
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 1
Query:  187 SWVRNLFHDCAVKSCDASLLLETVTGVASEQ-ASERSFGMRNFKYVSTIKAALEAECP-LKVSCADIVALSAREGIVMLGGPRIPIKTGRRDSRVSYLAEVEKFIPNHNDSIATALSVFNSIGIDDEGVVALYGAHSVGRVHCANL 618
            S +R  FHDC V  CD  +LL        EQ A   S  +R F  +   K   + +C    VSCAD++A++AR+           I  GR+D+R + L      +P   D+++   + F   G +   +V L GAH+VG   CA L
Sbjct:   93 SLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAVL 238          
The following BLAST results are available for this feature:
BLAST of BQ623981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_WHEAT3.995e-2234.43Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER1_SORBI1.162e-2135.84Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER69_ARATH2.589e-2134.12Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PERA_IPOBA8.620e-1729.38Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_SOLLC3.276e-1629.93Suberization-associated anionic peroxidase 2 OS=So... [more]
PERX_SOLTU7.297e-1630.61Suberization-associated anionic peroxidase OS=Sola... [more]
PER1_SOLLC1.626e-1529.93Suberization-associated anionic peroxidase 1 OS=So... [more]
PERN_IPOBA8.920e-1432.19Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01072 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01072 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623981 ID=BQ623981; Name=BQ623981; organism=Citrus sinensis; type=EST; length=637bp
ACTAAGAGGCTACGGTTTCATCTTTCCCCAAGTTTCTTCTTTCTGTTATT
ACCGTTGCTCTTGCAGTTTTATTCTGGAATGAGTGAGCTGCAGTTTAATT
ACTACGCACAGAGTTGCCCAAAAGCCGAAGAAATCATCAAGCAACAAGTC
GTTCAGCTATACTACAAACATGGAAACACTGCAGTCTCCTGGGTCAGAAA
TCTTTTCCACGATTGCGCCGTCAAGTCATGCGATGCATCGCTCTTGCTGG
AGACAGTGACAGGTGTTGCATCGGAGCAGGCATCGGAAAGAAGCTTTGGA
ATGAGAAATTTCAAGTACGTGAGCACAATCAAAGCAGCTCTTGAGGCTGA
ATGCCCCTTGAAAGTTTCTTGCGCCGATATCGTGGCCCTTTCTGCACGAG
AAGGCATTGTCATGTTGGGAGGCCCCCGTATCCCAATTAAAACTGGACGA
AGGGATAGCAGAGTGAGTTATTTGGCGGAGGTCGAAAAGTTCATCCCCAA
TCACAATGATAGCATAGCCACAGCCCTTTCCGTTTTTAATTCCATTGGCA
TCGATGATGAAGGAGTCGTTGCTCTTTATGGAGCTCATTCTGTAGGACGA
GTCCACTGCGCAAATCTCGTACACCGACTCTATCCCA
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