BQ624063

Overview
NameBQ624063
Unique NameBQ624063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_RHOSR (Putative phenylalanine aminotransferase OS=Rhodococcus sp. (strain RHA1) GN=pat PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 56/197 (28.43%), Postives = 93/197 (47.21%), Query Frame = 2
Query:   35 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            L    + I    G+     + V A C+ GDEVI     + +YP + ++A ATPV +P        LD   + + +T+++RL+ +C+P+NPTG+   K  L+     V     +LV  DE Y     + A     F   P +    + +  FSKA+ + G R+GY       V A  K+   F    ++++Q A +A+
Sbjct:   70 LGVATENIAAGCGSVSLCQELVQATCNDGDEVIFAWRSFEAYPVVTQVAGATPVKVPLTADHGHDLD--AMLAAITDRTRLIFVCNPNNPTGTALTKAELERFLDAVPAD--VLVALDEAYFEYNRSDADGIELFRGRPNV----VVLRTFSKAYGLAGIRVGYAVADPAVVTALTKVHIAF--AVNAVAQAAAIAS 256          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_XYLFA (Histidinol-phosphate aminotransferase OS=Xylella fastidiosa GN=hisC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 52/180 (28.89%), Postives = 89/180 (49.44%), Query Frame = 2
Query:   47 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILP-TRISENFLLD-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 577
            P+Q+L+  G+ + I   V AVC PG D V++  P +  Y   A++ +A  + +P    +  F  D P ++ +  T +++L+ LCSPSNP G+  P   ++ I + +A     LV+ DE Y      P+     A  P +    + +   SKA A+   R+G +    H VA   + Q+ +
Sbjct:   76 PEQLLIGRGSDEGIDLLVRAVCEPGCDPVLVTPPVFGMYAVSAQLQNAPVIQVPLVDDAAGFHADVPAIITAAQTSRAKLVFLCSPSNPVGAAIPLQQIETILQTLA--GTALVVVDEAYGEFSDVPSVVPLLARYPHL----VVLRTLSKAHALAAVRIGSVIADAHLVAILRRCQAPY 249          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: ATTY_RAT (Tyrosine aminotransferase OS=Rattus norvegicus GN=Tat PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 46/157 (29.30%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   56 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 526
            +++++G  Q+I   +  + +PG  ++IP P +  Y  +A        +      +++ +D K LES + EK+  L++ +PSNP GSV+ K  L +I   VA+   + +L+DEIY  ++++   +   A+L       L+  G +K + + GWRLG+I
Sbjct:  138 VILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKIL-AVAERQCVPILADEIYGDMVFSDCKYEPLANL-STNVPILSCGGLAKRWLVPGWRLGWI 292          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: ATTY_MOUSE (Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 46/157 (29.30%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   56 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 526
            +++++G  Q+I   +  + +PG  ++IP P +  Y  +A        +      +++ +D K LES + EK+  L++ +PSNP GSV+ K  L +I   VA+   + +L+DEIY  ++++   +   A+L       L+  G +K + + GWRLG+I
Sbjct:  138 VILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKIL-AVAERQCVPILADEIYGDMVFSDCKYEPMATL-STNVPILSCGGLAKRWLVPGWRLGWI 292          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: ATTY_BOVIN (Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 44/157 (28.03%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   56 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 526
            +++++G  Q+I   +  + +PG  +++P P +  Y  +A        +      +N+ +D K LES + EK+  LI+ +PSNP GSV+ +  L +I  + A+   + +L+DEIY  ++++ +     A+L       L+  G +K + + GWR+G+I
Sbjct:  131 VILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLLPEKNWEIDLKQLESLIDEKTVCLIVNNPSNPCGSVFSRRHLQKILAVAARQ-CVPILADEIYGDMVFSDSKFEPLATLSSK-VPILSCGGLAKRWLVPGWRMGWI 285          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_LEIXX (Putative phenylalanine aminotransferase OS=Leifsonia xyli subsp. xyli GN=pat PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 2
Query:   14 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 535
            KL E +G+    DQ+ + +G+   + Q + AV   GDEV+     + +YP +A +A AT V +P R       D   L + +T+++R +I+C+ +NPTG   P     E A  +A+ P  LLVL DE Y H         +   L       + +  FSKA+ +   R+GY  GP
Sbjct:   64 KLAERHGVDV--DQVHLGSGSVALLAQLIRAVAGAGDEVVYSWRSFEAYPGLATVAGATSVQVPNRADGGH--DLPALAAAITDRTRAVIVCTLNNPTG---PVVTAAEFASFMAEVPGDLLVLLDEAY-HEFETDEAAVNGIPLLSRHPNLVVLRTFSKAYGLAALRIGYAVGP 230          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS82_CAUCR (Histidinol-phosphate aminotransferase 2 OS=Caulobacter crescentus GN=hisC2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 59/199 (29.65%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   35 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVAACNKIQSQFTSGASSISQKAGVAAF 625
            L  +P +++VS G++  I     AV  PGD +++ +P + +Y    R A+A  + +P R++ NF +D   + +      +LL+LC+P+NPTG+        +   I+A  PR  +V  DE Y     A  T     +  G W   ++   FSKA+ + G R+GY +A     V   ++I+  F    +++SQ A +AA+
Sbjct:   96 LGVSPARVVVSPGSEALIDYVFRAVLHPGDSILLSSPTFPTYEIFGRCAEARIIDVP-RLA-NFDIDVPAVCAAAALGPKLLVLCTPNNPTGNALK---AADFQAILAATPRSTVVFVDEAYREYHEAFDTFAMLDAWGGPW---VSARTFSKAYGLAGLRMGYGVASSPELVDYLDRIRPPF--NVTAVSQAAALAAW 284          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_STRGG (Putative phenylalanine aminotransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pat PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14
Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 2
Query:   65 SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHII---YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAFR 628
            S G  Q +LQA      PGDEVI     + +YP + +++ AT V +P    E   LD   +   +T+++RL+ +C+P+NPTG+V  +    E+ R + + P  +LV+ DE Y+  I     P     +   P +      +  FSKA+ + G R+G+    +   AA  K    F  G S ++Q A VA+ R
Sbjct:   90 SVGVAQQLLQAT---SGPGDEVIYAWRSFEAYPIITQVSGATSVKVPLTDGEVHDLD--AMAEAITDRTRLIFVCNPNNPTGTVVRR---AELERFLDRVPSDVLVVLDEAYKEFIRDAEVPDGIEIYRDRPNV----AVLRTFSKAYGLAGLRVGFAVAHEPVAAALRKTAVPF--GVSQLAQDAAVASLR 267          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_THEPX (Histidinol-phosphate aminotransferase OS=Thermoanaerobacter sp. (strain X514) GN=hisC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14
Identity = 60/211 (28.44%), Postives = 102/211 (48.34%), Query Frame = 2
Query:   14 KLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP----KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAFR 628
            KLKEE        P  I V NG+ + I   +LA  + GD V  P P +  Y   ++IA A  V +P R+ E++  D     KV+E     + +L+ LC+P+NPTGSV  +   ++I +I+ K   ++V+ +  +E          +       +E  + +   SKAF + G R+GY    ++ +   N ++S +    +S+SQ   +   R
Sbjct:   63 KLKEELARYCGVVPTNIFVGNGSDEIIHLIMLAFINKGDVVAYPHPSFAMYSVYSKIAGA--VEIPVRLREDYNYDVDSFIKVIEK---YQPKLVFLCNPNNPTGSVIER---EDIIKIIQKSNGIVVVDEAYFEFY------GNTIVDAINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPY--NINSLSQIIALKVLR 257          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_BLOPB (Histidinol-phosphate aminotransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=hisC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14
Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = 2
Query:   50 DQILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 565
            DQILVS GA +SI   +   C+PG +VII   P +  Y   A I      I+P +  EN+ LD   ++S+L    +L+ +C+P+NPTG++   N L ++ +I+    R L+++DE Y  I + P    S      M+   + +   SKAFA+ G R G+       +    K+
Sbjct:   73 DQILVSRGADESIELLMKVFCNPGKDVIIFCPPTYGMYKTTAEILGINYRIIPKK--ENWQLDLASIKSQL-NNVKLIYICNPNNPTGNIIHLNSLKKLLKIIQN--RALLVTDEAY--IDFCP--DASLVRWLPMYPHLVILRTLSKAFALAGLRCGFTLANPEIIKLLEKV 236          
The following BLAST results are available for this feature:
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
PATR_RHOSR5.572e-1428.43Putative phenylalanine aminotransferase OS=Rhodoco... [more]
HIS8_XYLFA5.572e-1428.89Histidinol-phosphate aminotransferase OS=Xylella f... [more]
ATTY_RAT5.572e-1429.30Tyrosine aminotransferase OS=Rattus norvegicus GN=... [more]
ATTY_MOUSE5.572e-1429.30Tyrosine aminotransferase OS=Mus musculus GN=Tat P... [more]
ATTY_BOVIN5.572e-1428.03Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=... [more]
PATR_LEIXX7.278e-1432.00Putative phenylalanine aminotransferase OS=Leifson... [more]
HIS82_CAUCR7.278e-1429.65Histidinol-phosphate aminotransferase 2 OS=Cauloba... [more]
PATR_STRGG9.505e-1431.25Putative phenylalanine aminotransferase OS=Strepto... [more]
HIS8_THEPX9.505e-1428.44Histidinol-phosphate aminotransferase OS=Thermoana... [more]
HIS8_BLOPB9.505e-1432.37Histidinol-phosphate aminotransferase OS=Blochmann... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01154 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01154 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624063 ID=BQ624063; Name=BQ624063; organism=Citrus sinensis; type=EST; length=663bp
AGCAATTTGTCATAAACTTAAAGAGGAGAATGGTTTGTCATATACACCTG
ATCAGATTTTGGTCAGCAATGGAGCAAAGCAGAGCATTCTTCAAGCGGTT
CTTGCTGTCTGTTCTCCAGGAGATGAGGTTATAATTCCTGCACCATTTTG
GGTTAGTTACCCGGAAATGGCCAGGATCGCTGATGCAACACCTGTGATTC
TTCCAACACGCATTTCTGAAAATTTTCTCTTGGATCCAAAGGTTCTTGAG
TCCAAACTCACTGAGAAGTCAAGACTGTTGATTCTTTGTTCTCCATCTAA
CCCAACAGGATCTGTTTACCCCAAGAACTTGCTTGATGAGATTGCAAGGA
TTGTAGCAAAGCATCCCAGGCTTCTGGTTCTGTCTGATGAAATATATGAG
CACATAATTTACGCACCTGCAACTCACACAAGCTTTGCATCTTTGCCGGG
CATGTGGGAGAGGACTTTGACAGTTAATGGGTTCTCTAAGGCCTTTGCTA
TGACTGGTTGGCGACTTGGATATATTGCCGGCCCTAAGCATTTTGTTGCA
GCATGTAATAAGATCCAGAGTCAGTTCACTTCAGGTGCCAGTAGTATATC
TCAAAAAGCTGGTGTTGCTGCATTTAGGTTTGGGCTATGCTGGCGGGGAG
GGAGTTTCGAAAA
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