BQ624063

Overview
NameBQ624063
Unique NameBQ624063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_MOOTA (Histidinol-phosphate aminotransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=hisC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.417e-17
Identity = 55/209 (26.32%), Postives = 101/209 (48.33%), Query Frame = 2
Query:    8 CHKLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAFR 628
            C+ LKE     L    + +++ NG  + +        +PGDE+++  P +  Y   A++     + +PTR   NF  D   + + +T ++RL+ +C+P+NPTG++  +  LD   + V   P +LV+ DE Y   + A     S A +       + +  FSK + + G R+GY       +   N+++  F    + ++Q A VAA +
Sbjct:   91 CYYLKEALAAKLGVKQENLIIGNGTDEILKMLAETYINPGDEIVVADPTFSEYEFAAQVMGGRAIKVPTR---NFRHDLAAMAAAITPRTRLVFVCNPNNPTGTIVGQAALDGFLKQVP--PSVLVVLDEAYSDYVTAEHYPNSLAYVRAGRANVIILRTFSKIYGLAGLRVGYGVAVPEIIRDLNRVREPF--NVNLLAQVAAVAALK 292          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: DAPAT_DESAP (LL-diaminopimelate aminotransferase OS=Desulforudis audaxviator (strain MP104C) GN=dapL PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.157e-17
Identity = 59/200 (29.50%), Postives = 94/200 (47.00%), Query Frame = 2
Query:   32 GLSYTPDQILVSN-GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV--AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G+   P + +VS  G+K+ I         PGD V++P P +  Y     +A   P  +P      FL D   + ++   +++++ +  P+NPTG+V  K      AR+V  A+   +LV  D  Y  I +      SF  + G  E  +  +  SK + MTGWR G+ AG    V A  +++S   SG   + Q A +AA
Sbjct:   88 GVELDPQREVVSLIGSKEGIAHLPWCFVDPGDVVLVPDPGYPVYAGGTILAGGIPHPVPLTAGNGFLPDLAAIPAETARRAKVMFINYPNNPTGAVASKEFF---ARVVDFAREYGILVCHDAAYSEIAFDGYRPPSFLEVAGAREVGIEFHSVSKTYNMTGWRAGWAAGNAGAVEALGRLKSNLDSGVFQVVQYAAIAA 284          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_MYCVP (Putative phenylalanine aminotransferase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pat PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17
Identity = 61/196 (31.12%), Postives = 98/196 (50.00%), Query Frame = 2
Query:   35 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV-AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVA 619
            +++ P+ I V  G+     Q +    + GDEV+     +  YP   R A ATPV +P     +   D   + + +T+++RL+ +C+P+NPT +V      D +AR V A  P ++V+ DE Y   I       SF  L       + +  FSKA+ + G R+GY       +AA +K+   FT  A+S+SQ A +A
Sbjct:   70 VNFAPEYISVGCGSVSLCQQLIQITSTVGDEVLFGWRSFEIYPLQVRTAGATPVQVPLT---DHTFDLDAMLAAITDRTRLIFVCNPNNPTSTVVDP---DALARFVEAVPPHIMVVVDEAYVEYIRDGLAPDSF-GLVRAHSNVVVLRTFSKAYGLAGLRIGYAVADPDIIAALSKVYVPFT--ATSVSQAAAIA 256          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: DAPAT_CARHZ (LL-diaminopimelate aminotransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapL PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 2
Query:   32 GLSYTPDQILVSN-GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G+   P   +VS  G+K+ I         PGD V++P P +  Y     +A  T   +P +    FL D   +  ++  K++L+ +  P+NPTG+V      +++     K+  +LV  D  Y  I +      SF  + G  +  +  +  SK + MTGWR+G+  G    + A  +++S   SG     Q AG+ A
Sbjct:   86 GVELDPKTEVVSLLGSKEGIAHISWCYVDPGDLVLVPDPGYPVYEGGTILAGGTTYKMPLKPENGFLPDLDSIPEEVARKAKLMFINYPNNPTGAVADLGFFEKVVHFAKKY-EILVCHDAAYSEITFDGYRAPSFLEVKGAKDVGIEFHSLSKTYNMTGWRIGWAVGNAKAIDALGRLKSNIDSGVFQAIQYAGIKA 282          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_RHOCS (Histidinol-phosphate aminotransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=hisC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.200e-16
Identity = 61/193 (31.61%), Postives = 98/193 (50.78%), Query Frame = 2
Query:   47 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA-KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            P ++L  NG+ + +     A   PG EV+     ++ YP  AR A ATPV  P R   N   D   L ++++E++R++ + +P+NPTGS  P    D +AR+ A   P +L++ D  Y   + A   +    +L   ++  +    FSK F + G RLG+   P     A ++++S F    S  +Q AGVAA
Sbjct:   79 PARVLCFNGSDEVLHLLAQAYAGPGGEVLYSRHGFLVYPIAARAAGATPVAAPER---NLTTDVDALLARVSERTRIVYVANPNNPTGSYLP---ADALARLHAGLPPHVLLVIDAAYAEYVTA-NDYADGTALVARFDNVVMTRTFSKLFGLGGMRLGWAYCPPAVADALHRVRSPF--NVSVAAQAAGVAA 262          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: HIS8_DESHD (Histidinol-phosphate aminotransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=hisC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = 2
Query:   56 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP---TRISENFLLDPK-VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAFRFG 634
            IL  NG+ + I   +         V+I  P +  Y   AR+     + +P   T  S +F LD + +L++    +  +++LC+P+NPTG+++P+   +EI RIVA+  +++++ +       Y   +  S           L +  FSK FAM   RLGY+ G    + A N+ +  F    +S SQKAGV A  +G
Sbjct:   82 ILTGNGSDELIQLLMTTFGGEKGAVVIHPPTFSMYEAAARVTGTEVLEVPLLLTETSRDFRLDVEGILKAAAQPQVHMIVLCNPNNPTGTLFPR---EEILRIVAESGKIVIVDEA------YGEFSGESVVDQIPYCPNLLVMKTFSKLFAMAALRLGYLLGQPSIIGALNRARQPF--NVNSFSQKAGVIALNYG 267          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_MYCTU (Putative phenylalanine aminotransferase OS=Mycobacterium tuberculosis GN=pat PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 56/197 (28.43%), Postives = 90/197 (45.69%), Query Frame = 2
Query:   32 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G  + P+ + V  G+     Q V    S GDEV+     +  YP   R+A A P+ +P     +   D   + + +T+++RL+ +C+P+NPT +V   + L      V  H  +L+  DE Y   I           L       + +  FSKA+ + G R+GY  G    + A +K+   FT   SSI Q A +A+
Sbjct:   71 GPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPL---TDHTFDLYAMLATVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAH--ILIAIDEAYVEYI-RDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFT--VSSIGQAAAIAS 259          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_MYCTA (Putative phenylalanine aminotransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pat PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 56/197 (28.43%), Postives = 90/197 (45.69%), Query Frame = 2
Query:   32 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G  + P+ + V  G+     Q V    S GDEV+     +  YP   R+A A P+ +P     +   D   + + +T+++RL+ +C+P+NPT +V   + L      V  H  +L+  DE Y   I           L       + +  FSKA+ + G R+GY  G    + A +K+   FT   SSI Q A +A+
Sbjct:   71 GPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPL---TDHTFDLYAMLATVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAH--ILIAIDEAYVEYI-RDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFT--VSSIGQAAAIAS 259          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_MYCBT (Putative phenylalanine aminotransferase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pat PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 56/197 (28.43%), Postives = 90/197 (45.69%), Query Frame = 2
Query:   32 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G  + P+ + V  G+     Q V    S GDEV+     +  YP   R+A A P+ +P     +   D   + + +T+++RL+ +C+P+NPT +V   + L      V  H  +L+  DE Y   I           L       + +  FSKA+ + G R+GY  G    + A +K+   FT   SSI Q A +A+
Sbjct:   71 GPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPL---TDHTFDLYAMLAAVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAH--ILIAIDEAYVEYI-RDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFT--VSSIGQAAAIAS 259          
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Match: PATR_MYCBP (Putative phenylalanine aminotransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pat PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.954e-16
Identity = 56/197 (28.43%), Postives = 90/197 (45.69%), Query Frame = 2
Query:   32 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 622
            G  + P+ + V  G+     Q V    S GDEV+     +  YP   R+A A P+ +P     +   D   + + +T+++RL+ +C+P+NPT +V   + L      V  H  +L+  DE Y   I           L       + +  FSKA+ + G R+GY  G    + A +K+   FT   SSI Q A +A+
Sbjct:   71 GPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPL---TDHTFDLYAMLAAVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAH--ILIAIDEAYVEYI-RDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFT--VSSIGQAAAIAS 259          
The following BLAST results are available for this feature:
BLAST of BQ624063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
HIS8_MOOTA2.417e-1726.32Histidinol-phosphate aminotransferase OS=Moorella ... [more]
DAPAT_DESAP3.157e-1729.50LL-diaminopimelate aminotransferase OS=Desulforudi... [more]
PATR_MYCVP4.123e-1731.12Putative phenylalanine aminotransferase OS=Mycobac... [more]
DAPAT_CARHZ4.123e-1727.27LL-diaminopimelate aminotransferase OS=Carboxydoth... [more]
HIS8_RHOCS1.200e-1631.61Histidinol-phosphate aminotransferase OS=Rhodospir... [more]
HIS8_DESHD2.672e-1629.44Histidinol-phosphate aminotransferase OS=Desulfito... [more]
PATR_MYCTU5.954e-1628.43Putative phenylalanine aminotransferase OS=Mycobac... [more]
PATR_MYCTA5.954e-1628.43Putative phenylalanine aminotransferase OS=Mycobac... [more]
PATR_MYCBT5.954e-1628.43Putative phenylalanine aminotransferase OS=Mycobac... [more]
PATR_MYCBP5.954e-1628.43Putative phenylalanine aminotransferase OS=Mycobac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_01154 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01154 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624063 ID=BQ624063; Name=BQ624063; organism=Citrus sinensis; type=EST; length=663bp
AGCAATTTGTCATAAACTTAAAGAGGAGAATGGTTTGTCATATACACCTG
ATCAGATTTTGGTCAGCAATGGAGCAAAGCAGAGCATTCTTCAAGCGGTT
CTTGCTGTCTGTTCTCCAGGAGATGAGGTTATAATTCCTGCACCATTTTG
GGTTAGTTACCCGGAAATGGCCAGGATCGCTGATGCAACACCTGTGATTC
TTCCAACACGCATTTCTGAAAATTTTCTCTTGGATCCAAAGGTTCTTGAG
TCCAAACTCACTGAGAAGTCAAGACTGTTGATTCTTTGTTCTCCATCTAA
CCCAACAGGATCTGTTTACCCCAAGAACTTGCTTGATGAGATTGCAAGGA
TTGTAGCAAAGCATCCCAGGCTTCTGGTTCTGTCTGATGAAATATATGAG
CACATAATTTACGCACCTGCAACTCACACAAGCTTTGCATCTTTGCCGGG
CATGTGGGAGAGGACTTTGACAGTTAATGGGTTCTCTAAGGCCTTTGCTA
TGACTGGTTGGCGACTTGGATATATTGCCGGCCCTAAGCATTTTGTTGCA
GCATGTAATAAGATCCAGAGTCAGTTCACTTCAGGTGCCAGTAGTATATC
TCAAAAAGCTGGTGTTGCTGCATTTAGGTTTGGGCTATGCTGGCGGGGAG
GGAGTTTCGAAAA
back to top