BQ624101

Overview
NameBQ624101
Unique NameBQ624101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.941e-31
Identity = 62/132 (46.97%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNP+DY KP+Q+V+ EM+NGGVD S E  G +  M++A  C  + +GV+V+VGVP        +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SGESIR I+
Sbjct:  242 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.841e-31
Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = 1
Query:    1 FVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            FVNPK + K VQ+V+ EMT+ GVD + EC G+V  M +A E  H GWG +V+VGV    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK++ L++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  242 FVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 8.557e-31
Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNP+DY KP+Q+V+ EM+NGGVD S E  G +  M++A  C  + +GV+V+VGVP        +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR I+
Sbjct:  241 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 372          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 62/132 (46.97%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNP+DYDKP+ QV+ EMT+GGVD S E  G +  M+SA  C  +  GV+V+VGVP    +    PM LL+ R+ KG  FG YK + D+P +V  +M K+  LE  IT+  PF++IN+ FDL+ +G+SIR ++
Sbjct:  242 VNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 62/132 (46.97%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNP+DYDKP+ QV+ EMT+GGVD S E  G +  M+SA  C  +  GV+V+VGVP    +    PM LL+ R+ KG  FG YK + D+P +V  +M K+  LE  IT+  PF++IN+ FDL+ +G+SIR ++
Sbjct:  242 VNPQDYDKPIYQVLQEMTDGGVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPFAKINEGFDLLRAGKSIRTVL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 59/132 (44.70%), Postives = 87/132 (65.91%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K + D+P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR I+
Sbjct:  242 INPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAVYGGFKSKEDIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 402
            +NP DYDKP++ V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  236 INPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 402
            +NP DYDKP++ V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  236 INPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 402
            +NP DYDKP++ V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  236 INPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIR 402
            +NP DYDKP++ V+ ++   G+D + EC G+V  M +A E  H GWG +V++GV        T P  L+  R  KG+ FG  K RS LP +VE  M  +++LE F+TH +   EIN AFDLM  G+SIR +IR
Sbjct:  236 INPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIR 368          
The following BLAST results are available for this feature:
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1E_HORSE2.941e-3146.97Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADHX_OCTVU3.841e-3147.37Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH1S_HORSE8.557e-3146.21Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1_GEOKN5.547e-3046.97Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOBU5.547e-3046.97Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1A_MACMU7.244e-3044.70Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
FRMA_SHISS1.236e-2944.36S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOUT1.236e-2944.36S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOSM1.236e-2944.36S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC1.236e-2944.36S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624101 ID=BQ624101; Name=BQ624101; organism=Citrus sinensis; type=EST; length=660bp
TTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGA
AATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCC
AGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCT
GTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCAT
GAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACA
AACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAACAAGGAG
ATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGGAGATAAA
CAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGCATCATTC
GCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCA
GAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATA
AGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGA
GTTGTGTTTTCTACATATTTCTTACAGTCCCTTTTTATTTTTGTTTTTCT
GTTTGATGACTTGCTGCATATGGCGTACAAAGAGGTGTGTTTTCTACCTA
TTTCTTACTG
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