BQ624101

Overview
NameBQ624101
Unique NameBQ624101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    1 FVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            F+NP D   P+Q V+   T+GG+D + +CTG+V  M SA E  H GWG ++++GV        T P  L+  R  +G  FG  K RS LP +V++Y++ ++E++K+ITH  P  EIN+AF  M +G  I+ ++
Sbjct:  245 FINPNDLQSPIQDVLIHETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVTGRVWRGCAFGGVKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVL 377          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NP++ DKPVQ VI E+T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +L+  +THA+PF  IN A DLM  G+SIR I+
Sbjct:  246 LNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 375          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.791e-27
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNPKD+ KP+ +V+ EMT  GVD S E  G  + M +A    H  +GV+V+VGVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ FDL+ +G+SIR ++
Sbjct:  241 VNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.181e-26
Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 1
Query:    1 FVNPKDYDKPVQQVIAEMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            F+NPK+ +  VQ+++  +T       GG D S +CTG+V+ M  A EC H GWG ++++GV        T P  L+  R  KGT FG  + R+D+P +V+ YM+ ++E++  ITH +   +INK FDLM +GESIR ++
Sbjct:  236 FINPKNCENVVQEIV-NLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26
Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            VNPKD+ KP+ +V+ EMT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  LE  ITH +PF +IN+ FDL+  G+SIR ++
Sbjct:  242 VNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.720e-26
Identity = 55/132 (41.67%), Postives = 84/132 (63.64%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NPKD+ +P+ +V+  MT  GVD S E  G ++ M++A    H  +GV+V+VGVP         PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PFS+IN+ FDL+ +G+SIR ++
Sbjct:   52 INPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPPAAQNITFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMKKKFVLDPLITHTLPFSKINEGFDLLRAGKSIRSVL 183          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NP++ +KPVQ VI EMTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTL+G+ FG +     +P +V  Y N +  LE  +TH +PF +IN+A DL+  G+SIR I+
Sbjct:  247 LNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELILGRTLRGSSFGGWDV-DTVPKLVSDYKNGKFNLEALVTHTLPFEKINEALDLLKQGKSIRTIL 377          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NP++ +KPVQ VI EMTNGGVD +++C G  + M +  +C   GWG    VGV   D      P+ L+  RTLKGT FG +   + +P +V  Y N + +L+  +TH +PF +IN+A +L+  G+SIR ++
Sbjct:  247 LNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILGRTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 1
Query:    4 VNPKDYDKPVQQVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 399
            +NP D+ KP+ +V+ ++T G GVD S E  G  + MISAF   H   G +V+VGVP        +P+ L   RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  241 INPLDFKKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = 1
Query:    1 FVNPKDY-DKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 408
            FVNP    +K + +VI EMT+ G D S EC G    M  AF+    G G  +++G+  K         +LL  RT+ GT FG  KP+ D+P +V++Y+ KE+ LE  ITH + F EINKAF L+  G SIRCII MD
Sbjct:  249 FVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSIRCIIWMD 385          
The following BLAST results are available for this feature:
BLAST of BQ624101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
FADH2_SCHPO9.791e-2739.85Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH4_MOUSE9.791e-2743.18Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_STRCA9.791e-2743.18Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
FADH_PARDE2.181e-2640.29S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH1_APTAU2.849e-2643.18Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_ANAPL3.720e-2641.67Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]
ADHQ_RABIT2.412e-2541.67Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHP_RABIT3.150e-2540.91Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH1_NAJNA3.150e-2541.35Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADHL2_ARATH4.113e-2544.53Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624101 ID=BQ624101; Name=BQ624101; organism=Citrus sinensis; type=EST; length=660bp
TTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGA
AATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCC
AGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCT
GTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCAT
GAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACA
AACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAACAAGGAG
ATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGGAGATAAA
CAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGCATCATTC
GCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCA
GAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATA
AGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGA
GTTGTGTTTTCTACATATTTCTTACAGTCCCTTTTTATTTTTGTTTTTCT
GTTTGATGACTTGCTGCATATGGCGTACAAAGAGGTGTGTTTTCTACCTA
TTTCTTACTG
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