BQ624114

Overview
NameBQ624114
Unique NameBQ624114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_CRIGR (40S ribosomal protein S14 OS=Cricetulus griseus GN=RPS14 PE=2 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 9.473e-49
Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 3 
Query:   78 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA            AQSALRALARSGMK
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMK 125

HSP 2 Score: 35.4242 bits (80), Expect = 9.473e-49
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 1 
Query:  442 G*KIGRIEDVTPIPTDST 495
            G KIGRIEDVTPIP+DST
Sbjct:  123 GMKIGRIEDVTPIPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_RAT (40S ribosomal protein S14 OS=Rattus norvegicus GN=Rps14 PE=2 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 2.098e-48
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 3 
Query:   78 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RK ++ KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA            AQSALRALARSGMK
Sbjct:    1 MAPRKGKDKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMK 125

HSP 2 Score: 35.4242 bits (80), Expect = 2.098e-48
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 1 
Query:  442 G*KIGRIEDVTPIPTDST 495
            G KIGRIEDVTPIP+DST
Sbjct:  123 GMKIGRIEDVTPIPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14B_ANOGA (40S ribosomal protein S14b OS=Anopheles gambiae GN=RpS14b PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.116e-46
Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:   87 RKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            RKN+  KEE  V+LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    5 RKNKVAKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMK 126

HSP 2 Score: 34.6538 bits (78), Expect = 1.116e-46
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTPIP+DST
Sbjct:  126 KIGRIEDVTPIPSDST 141
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_AEDAE (40S ribosomal protein S14 OS=Aedes aegypti GN=RpS14 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.116e-46
Identity = 90/125 (72.00%), Postives = 102/125 (81.60%), Query Frame = 3 
Query:   78 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RKN+  KEE  V+LGP VR+GE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    1 MAPRKNKTVKEEVQVSLGPQVREGEIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMK 125

HSP 2 Score: 34.6538 bits (78), Expect = 1.116e-46
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTPIP+DST
Sbjct:  125 KIGRIEDVTPIPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14A_ANOGA (40S ribosomal protein S14a OS=Anopheles gambiae GN=RpS14a PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.454e-46
Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:   87 RKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            RKN+  KEE  V+LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    5 RKNKVVKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSSMK 126

HSP 2 Score: 34.6538 bits (78), Expect = 1.454e-46
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTPIP+DST
Sbjct:  126 KIGRIEDVTPIPSDST 141
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_NEUCR (40S ribosomal protein S14 OS=Neurospora crassa GN=rps-14 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.896e-46
Identity = 88/124 (70.97%), Postives = 99/124 (79.84%), Query Frame = 3 
Query:   78 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M  +K   P +EN++LGP +R+GE VFGVA IFASFNDTF+HVTDLSGRET  R+ GG+KVKADRDESSPYAAMLAAQDV+ RCKELGITALHIK+RA            AQSALRALARSGMK
Sbjct:    1 MPPKKAARPAQENISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETTDRVIGGIKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTRTPGPGAQSALRALARSGMK 124

HSP 2 Score: 33.4982 bits (75), Expect = 1.896e-46
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  442 G*KIGRIEDVTPIPTDST 495
            G KIGRIEDVTP P+DST
Sbjct:  122 GMKIGRIEDVTPTPSDST 139
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_DROME (40S ribosomal protein S14 OS=Drosophila melanogaster GN=RpS14a PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.896e-46
Identity = 91/125 (72.80%), Postives = 100/125 (80.00%), Query Frame = 3 
Query:   78 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RK +  KEE  V LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMK 125

HSP 2 Score: 34.6538 bits (78), Expect = 1.896e-46
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTPIP+DST
Sbjct:  125 KIGRIEDVTPIPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14A_DROYA (40S ribosomal protein S14a OS=Drosophila yakuba GN=RpS14a PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.896e-46
Identity = 91/125 (72.80%), Postives = 100/125 (80.00%), Query Frame = 3 
Query:   78 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RK +  KEE  V LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMK 125

HSP 2 Score: 34.6538 bits (78), Expect = 1.896e-46
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTPIP+DST
Sbjct:  125 KIGRIEDVTPIPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_BOMMO (40S ribosomal protein S14 OS=Bombyx mori GN=RpS14 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.292e-46
Identity = 91/125 (72.80%), Postives = 99/125 (79.20%), Query Frame = 3 
Query:   78 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+ RKN+  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRA            AQSALRALARS MK
Sbjct:    1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMK 125

HSP 2 Score: 34.2686 bits (77), Expect = 9.292e-46
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 1 
Query:  448 KIGRIEDVTPIPTDST 495
            KIGRIEDVTP+P+DST
Sbjct:  125 KIGRIEDVTPVPSDST 140
[Close]
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS14_CAEEL (40S ribosomal protein S14 OS=Caenorhabditis elegans GN=rps-14 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.492e-45
Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 3 
Query:   78 MSRRKNREPKEEN--VTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMK 449
            M+  +  + KEE   V+LGP  ++GE +FGVAHIFASFNDTF+H+TD+SGRET+VR+TGGMKVKADRDESSPYAAMLAAQDV+ RCK+LGI ALHIKLRA            AQSALRALAR+GMK
Sbjct:    1 MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMK 126

HSP 2 Score: 33.4982 bits (75), Expect = 3.492e-45
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  442 G*KIGRIEDVTPIPTDST 495
            G KIGRIEDVTPIP+D T
Sbjct:  124 GMKIGRIEDVTPIPSDCT 141
The following BLAST results are available for this feature:
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
RS14_CRIGR9.473e-4974.4040S ribosomal protein S14 OS=Cricetulus griseus GN... [more]
RS14_RAT2.098e-4873.6040S ribosomal protein S14 OS=Rattus norvegicus GN=... [more]
RS14B_ANOGA1.116e-4673.7740S ribosomal protein S14b OS=Anopheles gambiae GN... [more]
RS14_AEDAE1.116e-4672.0040S ribosomal protein S14 OS=Aedes aegypti GN=RpS1... [more]
RS14A_ANOGA1.454e-4673.7740S ribosomal protein S14a OS=Anopheles gambiae GN... [more]
RS14_NEUCR1.896e-4670.9740S ribosomal protein S14 OS=Neurospora crassa GN=... [more]
RS14_DROME1.896e-4672.8040S ribosomal protein S14 OS=Drosophila melanogast... [more]
RS14A_DROYA1.896e-4672.8040S ribosomal protein S14a OS=Drosophila yakuba GN... [more]
RS14_BOMMO9.292e-4672.8040S ribosomal protein S14 OS=Bombyx mori GN=RpS14 ... [more]
RS14_CAEEL3.492e-4568.2540S ribosomal protein S14 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01205 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01205 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624114 ID=BQ624114; Name=BQ624114; organism=Citrus sinensis; type=EST; length=564bp
TGTTTAGGGTTTTCACATTTTCCTTTCGTCTAGGAACAAACCCTAGCCTT
CTCAATCCATCTCGTGTTTTCGCAGGCATGTCGAGGAGAAAGAATAGGGA
GCCTAAGGAAGAGAATGTGACTCTAGGACCTGCTGTGAGAGATGGGGAGC
ATGTTTTTGGAGTTGCCCACATCTTTGCATCGTTCAATGATACATTTATT
CATGTGACTGATCTGTCAGGCAGAGAAACCCTTGTCCGTATCACTGGTGG
TATGAAGGTGAAAGCTGACCGAGATGAGTCCTCTCCATACGCTGCCATGC
TTGCAGCACAAGATGTTTCAACCAGATGCAAGGAGCTTGGAATCACTGCT
CTTCATATTAAGCTGCGTGCTACTGGTGGGAACAAAACCAAAACACCTGG
TCCAGGTGCCCAGTCTGCTCTTCGTGCCCTTGCTCGTTCTGGGATGAAAA
ATTGGTCGCATAGAGGATGTGACCCCTATTCCCACTGATAGCACACGCAG
AAAGGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTGTGTTGGTTGTCCCAT
TGGCTTGTTTTATG
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