BQ624114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS11_METBF (30S ribosomal protein S11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 156 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKNWSHRGCDPYSH 485 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++ P H Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPH 115
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS11_METS3 (30S ribosomal protein S11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps11p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17 Identity = 45/110 (40.91%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 156 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKNWSHRGCDPYSH 485 +G+A+I++S+N+T I VTD++G ET+ + +GG V+ADR ++SP+AAM AA ++ KE G LHI++RA AQ+ +RALAR+G+K P H Sbjct: 7 WGIANIYSSYNNTIITVTDITGAETISQWSGGKVVRADRQQASPFAAMAAATRIADDAKEKGFVGLHIRVRAPGGNGHRSPGPGAQATIRALARAGIKIGKIEDITPIPH 116
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Match: RS11_HALSA (30S ribosomal protein S11P OS=Halobacterium salinarium GN=rps11p PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.125e-17 Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 156 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKNWSHRGCDPYSH 485 +G+AH+ ASFN+T + VTD +G ETL + +GG VK +RDE+SPYAAM A+ ++ + GI +H+++R AQ+A+RALAR+G++ P H Sbjct: 7 WGIAHVHASFNNTIMTVTDQTGAETLAKSSGGSVVKQNRDEASPYAAMQMAEQLAEEVLDQGIEKVHVRVRGPGGNLQRSPGPGAQAAIRALARAGLEIGRIEDVTPIPH 116 The following BLAST results are available for this feature:
BLAST of BQ624114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624114 ID=BQ624114; Name=BQ624114; organism=Citrus sinensis; type=EST; length=564bpback to top |