BQ624222

Overview
NameBQ624222
Unique NameBQ624222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAI-PSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            D+ + +K A+AL  GL VIACIGE L+ERE+GKT +V F+QLKA   AI   W+N+V+AYEPVWAIGTGK ATP+QAQ+VH ALR+WL  NVS  V+   RI YGGSV  +N  ELA  +DIDGFLVGGASLK PEF  IVN+
Sbjct:  105 DELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLK-PEFVEIVNA 246          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.936e-44
Identity = 92/142 (64.79%), Postives = 105/142 (73.94%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS---WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATI 421
            D+ I +K  +AL+EGL VIACIGE L ERE+ KT +VC +QLKA A+ I S   W  VV+AYEPVWAIGTGKVATP+QAQEVH  LR W K N    V  K RIIYGGSV  +NC ELA+Q D+DGFLVGGASLK PEF  I
Sbjct:  107 DELIAEKVQHALAEGLSVIACIGETLSERESNKTEEVCVRQLKAIANKIKSADEWKRVVVAYEPVWAIGTGKVATPQQAQEVHNFLRKWFKTNAPNGVDEKIRIIYGGSVTAANCKELAQQHDVDGFLVGGASLK-PEFTEI 247          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_PARBA (Triosephosphate isomerase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=TPI1 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 1.953e-43
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 2
Query:    2 DDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            DD+F+ +K   A++ GL VI CIGE L+EREAGKT DV  +QL A A+ +    W+ VVIAYEP+WAIGTGKVAT EQAQEVHA++R WL   +S + A   R+IYGGSV  +NC +LA Q D+DGFLVGGASLK P F  I+N+
Sbjct:  104 DDEFVARKTKAAINGGLNVILCIGESLEEREAGKTIDVVTRQLDAVAEEVSPAEWNKVVIAYEPIWAIGTGKVATTEQAQEVHASIRKWLNEKISPEAAENIRVIYGGSVTENNCRDLAAQPDVDGFLVGGASLK-PAFVDIINA 247          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.551e-43
Identity = 92/144 (63.89%), Postives = 107/144 (74.31%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            D+FI +K   A+  GL VI CIGE L+EREA KT DV  +QL A A  +    W  VVIAYEPVWAIGTGKVAT EQAQEVH+A+R WLK+ +SA+ A  TRIIYGGSV+  NC +LAK+ DIDGFLVGGASLK P F  IVN+
Sbjct:  105 DEFIARKTKAAIEGGLQVIFCIGETLEEREANKTIDVVTRQLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLKDAISAEAAENTRIIYGGSVSEKNCKDLAKEADIDGFLVGGASLK-PAFVDIVNA 247          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.423e-43
Identity = 88/142 (61.97%), Postives = 105/142 (73.94%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS---WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATI 421
            D+ + +K  +AL+EGL V+ACIGE L ERE+GKT +VC +QL A A+ I S   W  VV+AYEPVWAIGTGKVA+P QAQEVH  LR W K N  + V  + RIIYGGSV  +NC ELA+Q D+DGFLVGGASLK PEF  I
Sbjct:  107 DELVAEKVQHALAEGLSVVACIGETLSERESGKTEEVCVRQLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVHNFLRKWFKTNTPSGVDQQIRIIYGGSVTAANCKELAQQHDVDGFLVGGASLK-PEFIDI 247          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.821e-42
Identity = 83/142 (58.45%), Postives = 99/142 (69.72%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            D FI  K  +AL +GL VI CIGE L+ER+A  T DVC +QL A A  +  W  +V+AYEPVWAIGTG  ATPE AQE H A+R+ L  ++ AD A KTRI+YGGSVNG N  E   + D+DGFLVGGASLK PEF  I+ S
Sbjct:  106 DDFIASKTKFALDQGLSVILCIGETLEERKANVTLDVCARQLDAVARVVSDWSKIVVAYEPVWAIGTGLAATPEDAQETHKAIREHLSKSIGADAAEKTRILYGGSVNGKNAPEFKDKADVDGFLVGGASLK-PEFVDIIKS 246          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_CAEEL (Triosephosphate isomerase OS=Caenorhabditis elegans GN=tpi-1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 6.284e-42
Identity = 88/142 (61.97%), Postives = 105/142 (73.94%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            D  I +K  +AL  G+ V+ CIGE+L+EREAG T DV F+QL+A  D   SW+N+VIAYEPVWAIGTGK A+ EQAQEVH  +R +LK  VS  VA  TRIIYGGSV   N AEL K+ DIDGFLVGGASLK P+F  I+N+
Sbjct:  105 DALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLK-PDFVKIINA 245          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.388e-41
Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 2
Query:    2 DDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            DD+FI  K  +AL +G+GVI CIGE L+E++AGKT DV  +QL A  + +  W NVV+AYEPVWAIGTG  ATPE AQ++HA++R +L + +    A++ RI+YGGS NGSN      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  105 DDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.119e-41
Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 2
Query:    2 DDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            DDQ I +K A+ALS+G+GVI CIGE L +++AG T  V  +QL+A  D +  W NVVIAYEPVWAIGTG  ATPE AQE+H ++R++L   +    A +TRI+YGGS NG N      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  105 DDQLIAEKTAFALSQGVGVILCIGETLDQKKAGTTLQVVERQLQAVIDKVKDWSNVVIAYEPVWAIGTGLAATPEDAQEIHHSIREFLAKKLGEKTAQETRILYGGSANGKNAVTFKDKPDVDGFLVGGASLK-PEFVDIINS 246          
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Match: TPIS_ASPOR (Triosephosphate isomerase OS=Aspergillus oryzae GN=tpiA PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.073e-41
Identity = 85/144 (59.03%), Postives = 105/144 (72.92%), Query Frame = 2
Query:    5 DQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 430
            D+FI +K   A+  G+ VI CIGE L+EREA KT +V  +QL A A  +    W  VVIAYEPVWAIGTGKVAT +QAQEVHAA+R WL + +S + +  TRIIYGGSV+  NC ELA++ D+DGFLVGGASLK P F  I+N+
Sbjct:  107 DEFIARKVKAAIDGGISVIFCIGETLEEREADKTIEVVTKQLNAAAKELTKEQWSKVVIAYEPVWAIGTGKVATTQQAQEVHAAIRKWLADAISPEASENTRIIYGGSVSEKNCRELAQERDVDGFLVGGASLK-PAFVDIINA 249          
The following BLAST results are available for this feature:
BLAST of BQ624222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_BOMMO2.308e-4463.64Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE... [more]
TPIS_SCHMA3.936e-4464.79Triosephosphate isomerase OS=Schistosoma mansoni G... [more]
TPIS_PARBA1.953e-4359.31Triosephosphate isomerase OS=Paracoccidioides bras... [more]
TPIS_EMENI2.551e-4363.89Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_SCHJA7.423e-4361.97Triosephosphate isomerase OS=Schistosoma japonicum... [more]
TPIS_DEBHA2.821e-4258.45Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_CAEEL6.284e-4261.97Triosephosphate isomerase OS=Caenorhabditis elegan... [more]
TPIS_YEAST2.388e-4155.94Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_ZYGBA3.119e-4156.64Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_ASPOR4.073e-4159.03Triosephosphate isomerase OS=Aspergillus oryzae GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01313 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01313 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624222 ID=BQ624222; Name=BQ624222; organism=Citrus sinensis; type=EST; length=657bp
AGATGATCAGTTTATAGGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGAC
TTGGTGTAATAGCTTGTATCGGGGAACAGTTGCAAGAGAGAGAAGCAGGA
AAAACTTTTGATGTCTGTTTTCAGCAACTTAAAGCCTATGCAGATGCTAT
ACCCAGTTGGGATAATGTAGTCATTGCATATGAGCCTGTATGGGCTATTG
GAACTGGTAAAGTGGCCACCCCCGAGCAGGCTCAGGAAGTACATGCTGCT
CTTCGTGATTGGCTTAAAAACAATGTCTCAGCAGACGTTGCCACTAAAAC
ACGTATTATCTATGGAGGGTCAGTAAATGGAAGCAATTGTGCTGAACTTG
CAAAACAAGAGGATATTGATGGTTTTCTGGTTGGTGGCGCTTCCTTGAAG
GGCCCAGAGTTTGCTACCATTGTCAATTCCGTAACATCCAAGAAAGTAGC
TGCTTGATGTATAAACCTGTTCTGTCAAGATCAACCAATAATAATGGGCT
AAGAGAATCTATATCAGTTTAAAGCTAATTAGTGTAACCAGCCTATGCCC
TTGCTATGTTCAATGAAAGTTTTGATAGTTTATTTATTTGTTTCTCCTTC
CCCAAACAATCGGAGATTCCTTCTGTTTCTCTATCGGGGGCTGAACTTGT
TTGATAC
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