BQ624229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.089e-22 Identity = 72/193 (37.31%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLYPGGPFDP 569 WYGPDR +L + P YLTGE PG+ YG+D GLS P+ F+K + E+IH RWAMLGA G + PE K G G EAVWFK G+ + L+Y G NLV A ++A ++VL+G E YR+ G E D+LYPGG FDP Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNP---NLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDP 195
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.259e-22 Identity = 68/190 (35.79%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYGPDR +L E P YLTGE PG+ YG+D GLS P F+K + E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ G ++ D LYPGG FDP Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGD--------------------------------------YGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDP 197
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.209e-21 Identity = 67/190 (35.26%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYG DR ++L G S P YL+GE PG+ YG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ G ++ED +YPGG FDP Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.209e-21 Identity = 67/190 (35.26%), Postives = 89/190 (46.84%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYGPDR +L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I + A+ A +++L+G E YRI G ++ D +YPGG FDP Sbjct: 29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDP 176
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 69/191 (36.13%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 12 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLYPGGPFDP 569 ++YGP+R +L G + P YLTGE PG+ YG+D GLS P+ F +Y+ ELIHARWAMLGA G PE K G G EAVWFK GA + L+Y G + N+V +++L+G E YR+ G E D LYPG FDP Sbjct: 35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGD--------------------------------------YGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDP 184
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 68/190 (35.79%), Postives = 89/190 (46.84%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYG DR ++L G L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EA WFK G+ + L+Y G + +L+ ++VL+G E YRI G ++ D LYPGG FDP Sbjct: 50 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDP 197
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 74/193 (38.34%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLYPGGPFDP 569 WYG DR FL + P YLTGE PG+ YG+D GLS P+ F+K + E+IH+RWAMLGA G I PE +K G G EAVWFK GA + L+Y G NLV A ++A ++VL+G E YR+ G E D LYPGG FDP Sbjct: 48 WYGADRPKFLGPF---SEQTPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDP 195
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21 Identity = 67/190 (35.26%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYGPDR +L E P YLTGE PG+ YG+D LS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ G ++ D LYPGG FDP Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGD--------------------------------------YGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP 198
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21 Identity = 67/190 (35.26%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLYPGGPFDP 569 WYGPDR +L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G + + A+ A +++L+G E YR+ G + D LYPGG FDP Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDP 198
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21 Identity = 70/190 (36.84%), Postives = 89/190 (46.84%), Query Frame = 3 Query: 15 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLYPGGPFDP 569 WYGPDR +L +IP YLTGE PG+ YG+D GLS P+ F++ + E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G E D LYPGG FDP Sbjct: 49 WYGPDRPKYLGPF---SEQIPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDP 196 The following BLAST results are available for this feature:
BLAST of BQ624229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624229 ID=BQ624229; Name=BQ624229; organism=Citrus sinensis; type=EST; length=569bpback to top |