BQ624267

Overview
NameBQ624267
Unique NameBQ624267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROWI (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila willistoni GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.971e-22
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  A  ++T ++              + G YVPP ++ G        R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ TG+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTAMDSKTMMENKATAAAAAVGDPKS-GKYVPPFLKEGGASGKPWARERDDSSAVRISNLSESMTEVDLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHFKFRQDAAAAIEILNGHGYDHLILCV 260          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_CRYNE (Eukaryotic translation initiation factor 3 subunit G OS=Cryptococcus neoformans GN=TIF35 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.880e-22
Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 3
Query:   57 MVCRTCGKKGDHWTSRCPFKD-LAAPAETFIDKPXXXXXXXXXXXXTKGT------YVPPGMRAGAERTGTDMRRRNDE-NSVRVTNLSEDTREPDLLELFRPF---GAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            +VCR C   G H+T+RCPF++ LAA      D               KG       YVPP  RAGA   G  M R  DE  ++RVT+LS D  E DL  LF+PF   G + R  +  D+ T +S+G  FV+F +K DA+ A+  LNG GYD+LIL V
Sbjct:  126 VVCRLCS--GQHYTARCPFREQLAAIDNLNADGAEEEQVVVSGTLAAKGAGETGGKYVPPSQRAGATGAGDSMFRARDELPTLRVTSLSIDAEEDDLRALFQPFAKNGKLGRANIVRDRNTRVSKGLAFVSFESKRDAEAAMAHLNGRGYDSLILEV 280          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_AEDAE (Eukaryotic translation initiation factor 3 subunit G OS=Aedes aegypti GN=eIF3-S4-1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.067e-22
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 3
Query:   18 DSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAER-TGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            DSL  + K       CR C  +G+HW+  CP+K  A  A     KP             K G YVPP MR   +   G + R R+D  ++R++NLSE   E DL EL +  G  S++++A D+ TG+ +GF +V+F ++ DA  AI  LNG+GYD+LIL V
Sbjct:  114 DSLKNIAK-------CRIC--EGEHWSLSCPYKGTAYEAGKA--KPVVPVQQEMAPTTAKSGKYVPPSMRDSQKPGMGGNPRGRDDTTAIRISNLSEAMTEADLEELVKKIGPHSKMFLARDKNTGLCKGFAYVHFKSRRDAATAIELLNGHGYDHLILNV 263          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROYA (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila yakuba GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.067e-22
Identity = 57/155 (36.77%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G    G       R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ TG+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTSMDSKTMMETKANAAAAAAISDPSKTGKYVPPFMKDGGGGPGGKNWGRGRERDDSSAVRISNLSESMTEADLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLILCV 266          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROER (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila erecta GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.067e-22
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G       R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ TG+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTSMDSKTMMETKANAAAAAAVSDPSKMGKYVPPFMKDGGGGSGGKNWGRGRDRDDSSAVRISNLSESMTEADLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLILCV 266          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EIF3G_COCIM (Eukaryotic translation initiation factor 3 subunit G OS=Coccidioides immitis GN=TIF35 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.618e-22
Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 3
Query:   63 CRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGT----YVPPGMRAGAERTGTDMRRRNDEN---SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            CR C   G+H+T+RCPFKD  AP +                    G+    YVPP +R G    G  M  R + +   ++RVTN+SE   E +L ++F  FG V+RV++A D++T +++GF F++F ++ DA RA  K++G+GY +LILRV
Sbjct:  134 CRICS--GEHFTARCPFKDTMAPVDEPTGPTGGDNEDEERPAGALGSGATAYVPPALRKGGSG-GEKMAGRYERDELATLRVTNVSELAEEGELRDMFGRFGHVTRVFLAKDKETNMAKGFAFISFADRADAARACEKMDGFGYRHLILRV 281          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROSI (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila simulans GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.643e-22
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G+      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTSMDSKTMMETKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLILCV 266          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROVI (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila virilis GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.129e-21
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+ +CP+K  +   E+   K               G YVPP ++ GA+      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  113 GKPMAKCRICN--GEHWSVKCPYKGTSMDMES---KAIAAATAAVGETNKTGKYVPPFLKDGAKG-----RERDDSSAVRISNLSESMTEDDLEELVKKIGPYTKMYLAREKNSGLCKGFAYVHFKYRKDAAEAIEILNGHGYDHLILSV 252          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROSE (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila sechellia GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.129e-21
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G+      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLILCV 266          
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Match: EI3G2_DROME (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila melanogaster GN=eIF3-S4-2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.129e-21
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 3
Query:   45 GAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRV 494
            G  +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G+      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F  ++DA  AI  LNG+GYD+LIL V
Sbjct:  114 GKNIAKCRICN--GEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLILCV 266          
The following BLAST results are available for this feature:
BLAST of BQ624267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EI3G2_DROWI2.971e-2236.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CRYNE3.880e-2242.04Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_AEDAE5.067e-2239.13Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROYA5.067e-2236.77Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROER5.067e-2236.77Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_COCIM6.618e-2238.41Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROSI8.643e-2236.13Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROVI1.129e-2136.67Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROSE1.129e-2136.13Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROME1.129e-2136.13Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624267 ID=BQ624267; Name=BQ624267; organism=Citrus sinensis; type=EST; length=495bp
AGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGTGGTGCT
GTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTGGACGTC
AAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCATTGATA
AACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACCAAGGGA
ACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGGAACCGA
TATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACCTATCGG
AGGACACTCGGGAACCTGACTTGCTTGAGCTCTTCCGACCTTTTGGTGCT
GTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAGCCGGGG
TTTTGGTTTTGTGAACTTTGTGAACAAGGAAGATGCTCAGAGAGCTATCA
ACAAACTGAATGGCTATGGTTATGACAATCTCATCCTCAGAGTTG
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