BQ624275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.010e-40 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DP Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 178
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.010e-40 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DP Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 178
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.010e-40 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DP Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 178
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.041e-33 Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPS 509 A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P+ Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPA 122
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.665e-33 Identity = 59/118 (50.00%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPS 509 + KRI +E+ +L DPP CSAGP ++++HW ATI+GPS +PY GG+F + I FP DYPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P+ Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPA 154
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.873e-32 Identity = 60/118 (50.85%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 A KR+ KE+ D+ K PP+ CSA V +++ W+AT+ GP SP+ GVF + I P DYPFKPP + F TK++HPNI S+G+IC ++ WSP L I VL +I S+LTDPNPD+P Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNP 119 HSP 2 Score: 34.6538 bits (78), Expect = 1.873e-32 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 505 PLVPEIAHMYKSDKAKYESTGRSWTQKYA 591 PL EIA +K+D+ + T + WT+KYA Sbjct: 119 PLETEIAQQFKTDRNAFNKTAKEWTKKYA 147
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.132e-32 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 216 SAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 S G + +++ W A I GP +PY GG+F ++I FP DYPFKPPK F+T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDP Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDP 124 HSP 2 Score: 30.0314 bits (66), Expect = 4.132e-32 Identity = 10/29 (34.48%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 505 PLVPEIAHMYKSDKAKYESTGRSWTQKYA 591 PLVPEI ++K+++ +++ R +T ++A Sbjct: 124 PLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 9.479e-31 Identity = 58/118 (49.15%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPS 509 A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP KPP V F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P+ Sbjct: 5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPA 122
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.840e-31 Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 162 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 506 +RI+KE + L ++P +A P + ++ + GP+DSP+ GGVF + + P DYP PKV F TK++HPNI+ G ICLD+LK++WSPAL I +LLSI +LL+ PNPDDP Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDP 120 HSP 2 Score: 31.187 bits (69), Expect = 9.840e-31 Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 505 PLVPEIAHMYKSDKAKYESTGRSWTQKYAM 594 PL ++A ++K ++A+ R WTQKYA+ Sbjct: 120 PLANDVAELWKVNEAEAIRNAREWTQKYAV 149
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.617e-30 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 156 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPS 509 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P+ Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 122 The following BLAST results are available for this feature:
BLAST of BQ624275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624275 ID=BQ624275; Name=BQ624275; organism=Citrus sinensis; type=EST; length=606bpback to top |