C21839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.197e-34 Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 1 Query: 64 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 K+KIGINGFGRIGRLVARV L+RDDVELVAVNDPFITTDYMTYMFKYDS HGQWK+ EL VKD TLLFG+KPVTVF R Sbjct: 4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHR 83
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.498e-32 Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1 Query: 91 GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 GRIGRLVARV LQRDDVELVAVNDPFI+TDYMTYMFKYDS HGQWKHHELKVKD+KTLLFGEK V VFG+R Sbjct: 1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIR 71
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.431e-27 Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 64 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 K+K+GINGFGRIGRLVARV L+RDD+ELVA+NDPFIT +YMTYMFKYDS HGQWK E+ + + L FG PV V+ R Sbjct: 6 KIKVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACR 85
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.359e-22 Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 154 VNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 VNDPFITTDYMTYMFKYD+ HGQWKHHE+KVKD KTLLFGEK V VFG R Sbjct: 1 VNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCR 50 HSP 2 Score: 26.9498 bits (58), Expect = 3.359e-22 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 3 Query: 291 FRC*DPEEXHWAXT*AEYVV 350 F C +PEE WA AEYVV Sbjct: 47 FGCRNPEEIPWAAAGAEYVV 66
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.501e-19 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 67 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVRTQRS 315 VK+GINGFGRIGRLV R L+ VE+VAVNDPFI DYM YMFK+DS HG++K ++ KD K ++ G KP+ VFG R S Sbjct: 3 VKVGINGFGRIGRLVIRNALEAQGVEVVAVNDPFIPLDYMVYMFKFDSVHGRYK-GTVEAKDGKLIIAG-KPIAVFGERDPAS 83
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.960e-19 Identity = 45/78 (57.69%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 70 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 K+GINGFGRIGR+V R L+ D+++VA+NDPFI DYM YMFKYDS HG++K +++ KD K ++ G KP++VFG R Sbjct: 4 KVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFK-GKVETKDGKLVIEG-KPISVFGER 79
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.448e-19 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 67 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVRTQRS 315 + IGINGFGRIGRLV R+ LQR D+++VAVNDPFI +Y YMFKYDS HG++K E+ KDD ++ G+ + VFG + S Sbjct: 3 ITIGINGFGRIGRLVLRIALQRSDIKVVAVNDPFIAPEYAAYMFKYDSTHGRYK-GEVTSKDDSLVIDGQS-IKVFGEKDPAS 83
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.161e-18 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1 Query: 58 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHH 234 M K KIGINGFGRIGRLV R +++D VE+VAVNDPFI DYM YMFKYDS HG++K H Sbjct: 1 MSKPKIGINGFGRIGRLVLRAAVEKDTVEVVAVNDPFINIDYMVYMFKYDSTHGRFKGH 59 HSP 2 Score: 21.1718 bits (43), Expect = 1.161e-18 Identity = 9/16 (56.25%), Postives = 9/16 (56.25%), Query Frame = 3 Query: 303 DPEEXHWAXT*AEYVV 350 DP E W AEYVV Sbjct: 85 DPAEIPWGVEGAEYVV 100
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18 Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 67 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFG 297 VK+GINGFGRIGR+V R ++ D+E+VAVNDPFI DYM YMFKYDS HG++K ++VKD K L K + VFG Sbjct: 3 VKVGINGFGRIGRIVLRNAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFK-GSVEVKDGK-LYINNKAIAVFG 77
BLAST of C21839 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.167e-18 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 58 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSXHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 303 MGKVK+GINGFGRIGRLV R V++VA+NDPFI +YM YMF+YDS HG++ H +K ++ K ++ G P+T+F R Sbjct: 1 MGKVKVGINGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQER 80 The following BLAST results are available for this feature:
BLAST of C21839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >C21839 ID=C21839; Name=C21839; organism=Citrus sinensis; type=EST; length=363bpback to top |