C21855

Overview
NameC21855
Unique NameC21855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length259
Libraries
Library NameType
Valencia orange young seeds cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9307 contig Csv1_Contig9307:31..290. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.378e-14
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            TRE  VYLAKLAEQAERYEEMV+ M ++ +S     EL+VEERNLLSVAYKNVIG+ RA
Sbjct:    4 TREDSVYLAKLAEQAERYEEMVENMKAVASSGQ---ELSVEERNLLSVAYKNVIGARRA 59          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.644e-13
Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            TRE+ VY+AKLAEQAERYEEMV+ M  +        ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    2 TREENVYMAKLAEQAERYEEMVEAMKKVAELDV---ELTVEERNLLSVAYKNVIGARRA 57          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.644e-13
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 3
Query:   42 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            M +P RE+ VY+A +A++AERYEEMV+FM+ +V +     ELTVEERNLLSVAYKNVIG+ RA
Sbjct:    1 MASP-REENVYMANVADEAERYEEMVEFMEKVVAALN-GEELTVEERNLLSVAYKNVIGARRA 61          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.644e-13
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3
Query:   42 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            M +P RE+ VY+A +A +AERYEEMV+FM+ +V +    TELTVEERNLLSVAYKNVIG+ RA
Sbjct:    1 MASP-REENVYMANVAARAERYEEMVEFMEKVVAALD--TELTVEERNLLSVAYKNVIGARRA 60          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 2.147e-13
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE  VYLAKLAEQAERYEEMV+ M ++ +S     EL+VEERNLLSVAYKNVIG+ RA
Sbjct:    4 SREDSVYLAKLAEQAERYEEMVENMKTVASSGQ---ELSVEERNLLSVAYKNVIGARRA 59          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.147e-13
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE  VYLAKLAEQAERYEEMV+ M ++ +S     EL+VEERNLLSVAYKNVIG+ RA
Sbjct:    4 SREDSVYLAKLAEQAERYEEMVENMKAVASSGQ---ELSVEERNLLSVAYKNVIGARRA 59          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.147e-13
Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 3
Query:   48 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            T  RE +VY+AKLAEQAERYEEMV   DS+   +    ELT+EERNLLSV YKNVIG+ RA
Sbjct:    4 TKDRENFVYIAKLAEQAERYEEMV---DSMKNVANLDVELTIEERNLLSVGYKNVIGARRA 61          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.804e-13
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 3
Query:   48 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            T  RE +VY+AKLAEQAERYEEMV+ M ++   +    ELTVEERNLLSV YKNV+G+ RA
Sbjct:    4 TKERENFVYVAKLAEQAERYEEMVEAMKNVANLNV---ELTVEERNLLSVGYKNVVGARRA 61          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.804e-13
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 3
Query:   54 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            +RE  VYL+KLAEQ+ERYEEMV++M  +    T   EL+VEERNL+SVAYKNV+GS RA
Sbjct:    3 SREDLVYLSKLAEQSERYEEMVQYMKQVAEMGT---ELSVEERNLISVAYKNVVGSRRA 58          
BLAST of C21855 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.782e-13
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 3
Query:   57 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSXRA 230
            RE +VY+AKLAEQAERYEEMV+ M ++        ELTVEERNLLSV YKNVIG+ RA
Sbjct:    7 RENFVYIAKLAEQAERYEEMVESMKNVANLDV---ELTVEERNLLSVGYKNVIGARRA 61          
The following BLAST results are available for this feature:
BLAST of C21855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
BMH2_YEAST7.378e-1471.19Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433_DICDI1.644e-1369.4914-3-3-like protein OS=Dictyostelium discoideum GN... [more]
14335_SOLLC1.644e-1363.4914-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
14332_SOLTU1.644e-1365.0814-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
BMH1_YEAST2.147e-1369.49Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
1433_CANAL2.147e-1369.4914-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433B_VICFA2.147e-1365.5714-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433C_SOYBN2.804e-1363.9314-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14332_ENTHI2.804e-1364.4114-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
1433D_SOYBN4.782e-1367.2414-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC21855 Valencia orange young seeds cDNA Citrus sinensis cDNA clone corVSSG-33R 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>C21855 ID=C21855; Name=C21855; organism=Citrus sinensis; type=EST; length=259bp
GGCACGANTCCAGTTAACTTTACAGTTTCTGCAATTNTGCTATGGGAACC
CCGACGAGAGAGCAATACGTTTACCTGGCGAAACTCGCCGAGCAAGCNGA
GCGCTATGAAGAGATGGTTAAGTTCATGGACAGCCTCGTCACTTCCTCCA
CTCCGGCGACTGAACTCACCGTCGAGGAGCGCAACCTCCTCTCCGTTGCT
TACAAGAACGTCATCGGCTCTNTTCGCGCCGGTGGNGTATTATCTCCTCT
ATCGAGCAG
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