C21901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.979e-23 Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 63 MASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 MA KR KEL DLQ+DPPA CSAGPV DD+FHWQATIMGP DS + GGVF +++HFP DYPFK Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.979e-23 Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 63 MASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 MA KR KEL DLQ+DPPA CSAGPV DD+FHWQATIMGP DS + GGVF +++HFP DYPFK Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.336e-22 Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 63 MASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 MA KR +KEL DL +DPPA CSAGPV +DMFHWQATIMGP+DSP+ GG F ++I FP +YPFK Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFK 63
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.336e-22 Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 63 MASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 MA KR +KEL DL +DPPA CSAGPV +DMFHWQATIMGP+DSP+ GG F ++I FP +YPFK Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFK 63
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.251e-21 Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 3 Query: 63 MASKRXNKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 MASKR ++EL+D+Q+ PPA+CSAGPVA+ D+FHWQATIMGP DSP++GGVF VSI F DYPFK Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFK 64
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 66 ASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 + KR +E+ +L DPP CSAGP D+++HW ATI+GPS +P+ GG+F + I FP DYPFK Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.899e-15 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 42 SLLRNSQMAS---KRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 S+ +NS++ S KR KEL D+ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F P+YPFK Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFK 109
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.899e-15 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 42 SLLRNSQMAS---KRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 S+ +NS++ S KR KEL D+ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F P+YPFK Sbjct: 37 SMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFK 109
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.651e-15 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 66 ASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 ++KR KEL ++ DPP +CSAGP D+++ W +TI+GP S + GGVF + IHF P+YPFK Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFK 148
BLAST of C21901 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.935e-14 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 66 ASKRXNKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFXVSIHFPPDYPFK 251 ++KR KEL ++ DPP +CSAGP D+++ W++TI+GP S + GGVF + I F PDYPFK Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFK 117 The following BLAST results are available for this feature:
BLAST of C21901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >C21901 ID=C21901; Name=C21901; organism=Citrus sinensis; type=EST; length=260bpback to top |