C21905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_SYNR3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain RCC307) GN=fabZ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.032e-20 Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 10 YNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 + PG AVAIKN+T+N+ F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++ + F FAGID VRFR+PV+ GD L + L+ L+ Sbjct: 36 HEPGKRAVAIKNITLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLRITCELLSLK 123
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_PROM0 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9301) GN=fabZ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.032e-20 Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNASDSKDXGK 306 PG AVA+KNVT+N+ F GHFP+RP+MPGVL+VE+MAQVGG+++ Q P++ + F FAGI+ V+FRKPV+ GD L++ L+ ++ K G+ Sbjct: 38 PGERAVAVKNVTLNEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRKPVVPGDQLIISCELLSIKRQRFGKVKGE 133
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CARHZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=fabZ PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.348e-20 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 PG AV IKNVTIN+ FF GHFP RPIMPGVL++EAMAQVG + +L E + FAGID RFRKPV+ GD +V + L+K++ + Sbjct: 32 PGEKAVGIKNVTINEPFFQGHFPGRPIMPGVLLLEAMAQVGAVAILTDERYAGKLPM-FAGIDGARFRKPVLPGDQVVFEVELLKIKGS 119
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_PROM5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=fabZ PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.760e-20 Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNASDSKDXGK 306 PG AVA+KNVTIN+ F GHFP+RP+MPGVL+VE+MAQVGG+++ Q P++ + F FAGI+ V+FR+PV+ GD LV+ L+ ++ K G+ Sbjct: 38 PGHKAVALKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRRPVLPGDQLVITCELLSIKRQRFGKVKGE 133
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_ACAM1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acaryochloris marina (strain MBIC 11017) GN=fabZ PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.002e-20 Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 10 YNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 Y AV IKNVT+N+ FF GHFP RP+MPGVL+VEAMAQVGG+V+ Q S + F F GIDKVR R+ V+ GD LV+ + L+ Sbjct: 39 YKESERAVGIKNVTMNEEFFQGHFPGRPLMPGVLIVEAMAQVGGIVLAQLPDIPSGKLFVFTGIDKVRIRRSVVPGDQLVITAEFLSLK 127
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_SYNS3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain CC9311) GN=fabZ PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.921e-20 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 PG AVA+KNVT N+ F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++ + F FAGID VRFR+PV+ GD L + L+ L+ Sbjct: 40 PGERAVALKNVTFNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLRITCELLSLK 125
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: LPXZ_CHLTE (Bifunctional enzyme lpxC/fabZ OS=Chlorobium tepidum GN=lpxC/fabZ PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.121e-20 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 V+IKNVT+N+ FF GHFP PIMPGVL++EAMAQ GG++ML + F GIDK RFRKPV+ GDTLV+ + ++ Sbjct: 355 VSIKNVTMNEPFFQGHFPGNPIMPGVLIIEAMAQTGGIMMLNGKENIKESVVFFMGIDKARFRKPVLPGDTLVIEAVMTNMR 436
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CLOPS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium perfringens (strain SM101 / Type A) GN=fabZ PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.688e-20 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 VA KNVTIN+ FF GHFPD P+MPGVL+VEA+AQ G + +L E + F FAGIDKVRF+K V+ GDTL + + ++KL+ + Sbjct: 32 VAYKNVTINEPFFQGHFPDYPVMPGVLIVEALAQAGAIALLNKEEFKGKTPF-FAGIDKVRFKKQVLPGDTLRLEVEIIKLRGS 114
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CLOPE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium perfringens GN=fabZ PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.688e-20 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 VA KNVTIN+ FF GHFPD P+MPGVL+VEA+AQ G + +L E + F FAGIDKVRF+K V+ GDTL + + ++KL+ + Sbjct: 32 VAYKNVTINEPFFQGHFPDYPVMPGVLIVEALAQAGAIALLNKEEFKGKTPF-FAGIDKVRFKKQVLPGDTLRLEVEIIKLRGS 114
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CLOP1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=fabZ PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.688e-20 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 VA KNVTIN+ FF GHFPD P+MPGVL+VEA+AQ G + +L E + F FAGIDKVRF+K V+ GDTL + + ++KL+ + Sbjct: 32 VAYKNVTINEPFFQGHFPDYPVMPGVLIVEALAQAGAIALLNKEEFKGKTPF-FAGIDKVRFKKQVLPGDTLRLEVEIIKLRGS 114 The following BLAST results are available for this feature:
BLAST of C21905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >C21905 ID=C21905; Name=C21905; organism=Citrus sinensis; type=EST; length=312bpback to top |