C21905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=fabZ PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.084e-13 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 40 KNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 KNV+ N+ FF GH+P PIMPGVL +EA+AQ G + +L E + FAG +KVRF+ V+ GD L + +VKL+ Sbjct: 38 KNVSANEQFFQGHYPQEPIMPGVLQIEALAQAGAVAILSMEKFKGKTPL-FAGTNKVRFKAKVVPGDRLDLYCEIVKLK 115
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_ANADE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=fabZ PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.084e-13 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGL---VMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 VA+K VT+N+ FF GHFP +P+MPGVL++EA+AQ L + L+P+ + + GID RFR+PV+ GD L + + + K + A Sbjct: 42 VALKGVTMNEPFFQGHFPAQPVMPGVLILEALAQAAALLATMSLKPDEVKDKITY-LMGIDGARFRRPVVPGDRLELEVEVTKQKGA 127
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_PSYIN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Psychromonas ingrahamii (strain 37) GN=fabZ PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.722e-13 Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 10 YNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVML----QPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVK 270 Y PG IKN++ N+ F GHFPD PI PGV+++E++AQ G++ +P V E + A +DKVRFR+PVI GD L + + +K Sbjct: 32 YVPGKRLHGIKNISFNEPQFTGHFPDTPIYPGVMILESLAQATGVLAFATYGKPAV---NELYFLASMDKVRFRRPVIPGDVLDLEVIYLK 119
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_MARAV ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fabZ PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.722e-13 Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 4 TRYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGL-----VMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLV 267 T G S KNV+ N+ FF GHFPD PIMPGVL++EAMAQ+ G+ V +P G + AG K RF++PV+ GD L M + Sbjct: 24 TEVEKGKSIKGYKNVSFNEPFFTGHFPDNPIMPGVLIIEAMAQLSGILGFVTVERKPSDGVVQ---YLAGSSKARFKRPVLPGDRLDMESEFI 113
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_HELHP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Helicobacter hepaticus GN=fabZ PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.722e-13 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 34 AIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVK 270 A KNVTIN+ F GHFP++PI PGV+ +E MAQ GGL+ G + F ID V+FR PV+ GD LV + ++K Sbjct: 52 AYKNVTINEEVFLGHFPNKPIYPGVMQIEGMAQAGGLLAFVSMFGDNVAEAKNKIVYFMTIDNVKFRIPVVPGDRLVYELKVLK 135
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_HALHL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=fabZ PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.722e-13 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 10 YNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN--FXFAGIDKVRFRKPVIAGDTL 246 + P +IKNVTIN+ FF GHFP +P+MPGVL++E++AQ G++ + +N GIDK RF++PV GD L Sbjct: 34 FQPHEHLASIKNVTINEPFFVGHFPQKPVMPGVLILESLAQACGMLAFKSVQDTLTDNDVLYLVGIDKARFKRPVQPGDQL 114
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_CLOB8 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=fabZ PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.722e-13 Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 40 KNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 KNV+ N+ FF GH+P+ PIMPGVL VEA+AQ G + +L E + FAGI+KVRF+ V+ GD L + ++K++ Sbjct: 38 KNVSANEAFFQGHYPEEPIMPGVLQVEALAQTGTVAILSMERFKGKTPL-FAGINKVRFKGKVVPGDKLDLYCEIIKIK 115
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_RICBR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia bellii (strain RML369-C) GN=fabZ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.554e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 13 NPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTL 264 +P S IKNVT+N+ F GHFP RP+MPGVLMVEAMAQ+ +++ + + I+ +FRK V GDT+ + T+ Sbjct: 28 DPNKSITGIKNVTVNEPQFTGHFPARPVMPGVLMVEAMAQLAAILVAKSLGSTKNKEVFLMAIENSKFRKVVQPGDTMHIHATI 111
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_METRJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=fabZ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.554e-13 Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 25 SAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ--PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMT 261 S V IKNVT N+ F GHFPD P+ PGVL++E MAQ G + + G + + F IDK +FRKPV GD + MT Sbjct: 44 SCVGIKNVTANEPQFMGHFPDMPVFPGVLLIEGMAQTAGAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVRFHMT 124
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_IDILO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Idiomarina loihiensis GN=fabZ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.554e-13 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 34 AIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLV--MLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVK 270 AIKNVT N+ F GHFP +PI PGVL++EA+AQ GL+ + + + + FAGID RF++ VI GDT+ +T K Sbjct: 40 AIKNVTFNEPMFNGHFPAKPIFPGVLLLEAIAQACGLLGFKITESKKNANDLYLFAGIDNARFKRQVIPGDTVDFFVTFEK 120 The following BLAST results are available for this feature:
BLAST of C21905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >C21905 ID=C21905; Name=C21905; organism=Citrus sinensis; type=EST; length=312bpback to top |