C21905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_RUBXD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=fabZ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGL-VMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ 276 PGV AV +KNVT N+ FF GHFP P+MPGVL+VEAMAQVG + VM E G FAGID VRFR+ V+ GD L M + + +L+ Sbjct: 31 PGVRAVGVKNVTQNEPFFQGHFPGYPVMPGVLIVEAMAQVGAVGVMAVEEYRGRLA--LFAGIDGVRFRRQVVPGDALRMEVEIDRLR 116
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_BORPE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella pertussis GN=fabZ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKL 273 PG S VAIKNV+IN+ FF GHFP P+MPGVL+VEAMAQ L E G G++ + GID RFRKPV+ GD L + + +L Sbjct: 29 PGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGARFRKPVVPGDQLRLEVEAERL 119
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_BORPA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella parapertussis GN=fabZ PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKL 273 PG S VAIKNV+IN+ FF GHFP P+MPGVL+VEAMAQ L E G G++ + GID RFRKPV+ GD L + + +L Sbjct: 29 PGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGARFRKPVVPGDQLRLEVEAERL 119
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_BORBR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella bronchiseptica GN=fabZ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKL 273 PG S VAIKNV+IN+ FF GHFP P+MPGVL+VEAMAQ L E G G++ + GID RFRKPV+ GD L + + +L Sbjct: 29 PGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGARFRKPVVPGDQLRLEVEAERL 119
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_ACIAD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acinetobacter sp. (strain ADP1) GN=fabZ PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLV--MLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLV 267 V KNV+IN+ FF GHFPD PIMPGVL+VEA+AQ+ G++ ++ E F FAG +KVRF+K V+AGD LV++ LV Sbjct: 33 VGYKNVSINEEFFQGHFPDYPIMPGVLIVEALAQISGILGFIMNNETPKPGSLFLFAGAEKVRFKKQVVAGDQLVLKAELV 113
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_STRS2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus suis (strain 98HAH33) GN=fabZ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17 Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 31 VAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVK 270 VA+KNVTIN+ FF GHFPD P+MPGVL++EA+AQ G++ L E + F +AG+DKV+F+K V+ GD L+M VK Sbjct: 32 VALKNVTINEPFFNGHFPDYPVMPGVLIMEALAQTAGVLELSKEENKGKLVF-YAGMDKVKFKKQVVPGDQLIMTAKFVK 110
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_PELCD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=fabZ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17 Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLV 267 PG AV IKNVTIN+ FF GH+P PIMPGVL++EAMAQVGG V + F GI+K RFR+PV GD L +++ L+ Sbjct: 29 PGKRAVGIKNVTINEPFFQGHYPGHPIMPGVLIIEAMAQVGGAVAAITAGDKDDQVPYFTGINKARFRRPVGPGDVLQLQLELL 112
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_OENOB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=fabZ PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17 Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 19 GVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQN 279 G +A KNVTIN+ FF GHFP P+MPGVL+VEA+AQ G + +L+ + + + F G+DKV+FR+ V GDTL + +TL KL++ Sbjct: 28 GERILAQKNVTINEEFFQGHFPGNPVMPGVLIVEALAQAGAIALLKMDRFAGKTPY-FGGVDKVKFRRMVRPGDTLTLNVTLDKLKD 113
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_METCA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylococcus capsulatus GN=fabZ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 16 PGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQ--PEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVK 270 PG +AIKNVT N+ FF GHFP PIMPGVL++EA+AQ GL+ + P+V G + G+DKVRF++PV+ GD L + T ++ Sbjct: 27 PGKRLLAIKNVTYNEPFFQGHFPRVPIMPGVLIIEALAQTTGLLASETAPDVLGKGATYYLVGLDKVRFKRPVVPGDQLRLEATYLR 113
BLAST of C21905 vs. ExPASy Swiss-Prot
Match: FABZ_LISW6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=fabZ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 19 GVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFXFAGIDKVRFRKPVIAGDTLVMRMTLVKLQNA 282 G AIKNVT N+ FF GHFP+ P+MPGVL+VEA+AQ G+ M+Q E + FAGID RF++ VI GD L++ + +++ A Sbjct: 29 GKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIGL-FAGIDGCRFKRQVIPGDQLLLEAEITRMRGA 115 The following BLAST results are available for this feature:
BLAST of C21905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >C21905 ID=C21905; Name=C21905; organism=Citrus sinensis; type=EST; length=312bpback to top |