CB250244

Overview
NameCB250244
Unique NameCB250244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2173 contig Csv1_Contig2173:102..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_PSEPU (Lactoylglutathione lyase OS=Pseudomonas putida GN=gloA PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40
Identity = 82/159 (51.57%), Postives = 103/159 (64.78%), Query Frame = 1
Query:   52 PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI 528
            PG+    D AT  +    TM R+KD + SLDFY+R+LG  L+ + DF E KFSLYFL   D A+ PAD   R  W    P  +ELTHN GTE D DF  YH+GN++PRGFGHI ++V DV  A ERFE L V F K+   G++  +AFIKDPD YW+E+
Sbjct:   10 PGVTAQADPATAQFVFNHTMLRVKDIEKSLDFYTRVLGFKLVDKRDFVEAKFSLYFLALVDPATIPADDDARHQWMKSIPGVLELTHNHGTERDADF-AYHHGNTDPRGFGHICVSVPDVVAACERFEALQVPFQKRLSDGRMNHLAFIKDPDGYWVEV 167          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28
Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query:   88 GYFMQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFE-RLG--VEFAKKPDGGKLKGVAFIKDPDDYWIEI 528
            G     TM RIK+P  SL+FY  +LGM LL+  +    KF+LYFLGY          V +T   F   + +ELTHNWGTE+DP+F  YHNGNSEP+G+GHI I+ DD     +  E + G  ++++ K + G++K +AF+KDPD Y IE+
Sbjct:  180 GNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGY---------GVPKTDSVFSCESVLELTHNWGTENDPNFH-YHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEV 319          

HSP 2 Score: 125.946 bits (315), Expect = 2.051e-28
Identity = 68/157 (43.31%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   97 MQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW----TFGKPATIELTHNWGTESDPDFKGYHNGNSEP-RGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 552
            +  T  R+KDP  ++ FY+   GM LL R DF E KFSLYFL +      P D + +        F     +ELTHNWGTE +PD+K  +NGN EP RGFGHI  +V D+ K  E  E  GV+F K+   G+ K +AF   PD YWIE+      G+
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSF------PKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYK-INNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLSEGRQKDIAFALGPDGYWIELITYSREGQ 172          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 65/180 (36.11%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    4 LLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGN-SEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK 540
            L+S + ++PK + +N              +    TM R+KDP+ S+ FY + LGM ++ + D P  KF+ YFL Y      P+D     +    +   +ELTHNWGTE +     YHNGN  + +G+GH+ I+VD++  A  +FE  G+ F KK   G++K +AF+ DPD+YW+E+ + K
Sbjct:  150 LVSQSETKPKANISN--------------FRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAY------PSD-----LPRHDREGLLELTHNWGTEKESG-PVYHNGNDGDEKGYGHVCISVDNINAACSKFEAEGLPFKKKLTDGRMKDIAFLLDPDNYWVEVIEQK 302          

HSP 2 Score: 108.997 bits (271), Expect = 2.595e-23
Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query:   91 YFMQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP-RGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI 528
            Y +  TM R+KD   SL FY+ + GM L+ +  F E +FSL FL + D   A    V+R+     +   +ELT+N+GTE   +   Y NGN+EP RGFGHI  TVD++  A    E  GV F KK   GK+K +AF  DPD+YWIE+
Sbjct:   10 YKLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAF-DGPGALNHGVERSK----REGILELTYNFGTEKK-EGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLSDGKMKHIAFALDPDNYWIEL 150          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19
Identity = 60/150 (40.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLKT 543
            TM R+ + + SLDFY  +LGM LL+R D+PE +F+L F+GY        D  D TV        +ELTHNW TE       Y  GN+    +GHI + VDD Y+A ER +R G    +  + G +K     +AF++DPD Y IE    K+
Sbjct:    6 TMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGY-------GDETDSTV--------LELTHNWDTER------YDLGNA----YGHIAVEVDDAYEACERVKRQGGNVVR--EAGPMKHGTTVIAFVEDPDGYKIEFIQKKS 128          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19
Identity = 60/150 (40.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLKT 543
            TM R+ + + SLDFY  +LGM LL+R D+PE +F+L F+GY        D  D TV        +ELTHNW TE       Y  GN+    +GHI + VDD Y+A ER +R G    +  + G +K     +AF++DPD Y IE    K+
Sbjct:    6 TMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGY-------GDETDSTV--------LELTHNWDTER------YDLGNA----YGHIAVEVDDAYEACERVKRQGGNVVR--EAGPMKHGTTVIAFVEDPDGYKIEFIQKKS 128          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 1
Query:   94 FMQQTMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEI 528
            F+  TM R+ D   SL FY  +LGM+LL++ D+P  +F+L F+GY   +               + A IELTHNWGT+       Y  GN    GFGHI + V+D+Y   ++    G +  ++P  G +K     +AF++DPD Y IE+
Sbjct:    2 FLLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKES---------------ENAVIELTHNWGTDK------YDLGN----GFGHIALGVEDIYSTCDKIRDKGGKVVREP--GPMKHGTTVIAFVEDPDGYKIEL 123          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.190e-17
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLK 540
            TM R+ D   S++FY++++GMSLL++ +  E K++L FLGY D +                 A IELT+NWG         Y  GN+    +GHI I VDD+Y   +  +  G    ++P  G +KG    +AF+KDPD Y IE+   K
Sbjct:    9 TMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQG---------------AVIELTYNWGVAD------YEKGNA----YGHIAIGVDDIYATCDTIKAAGGIVTREP--GPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLKTIGK 552
            TM R+ D + S+ FY+ +LGM LL+  + PE K+SL F+GY                   + A IELT+NWG ES      Y  GN+    +GHI ++VD+  +A ER  + G    +  + G +KG    +AF++DPD Y IE+ + K  G+
Sbjct:    6 TMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVES------YDMGNA----YGHIALSVDNAAEACERIRQNGGNVTR--EAGPVKGGSTIIAFVEDPDGYKIELIEAKDAGR 131          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLKTIGK 552
            TM R+ D + S+ FY+ +LGM LL+  + PE K+SL F+GY                   + A IELT+NWG ES      Y  GN+    +GHI ++VD+  +A ER  + G    +  + G +KG    +AF++DPD Y IE+ + K  G+
Sbjct:    6 TMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVES------YDMGNA----YGHIALSVDNAAEACERIRQNGGNVTR--EAGPVKGGSTIIAFVEDPDGYKIELIEAKDAGR 131          
BLAST of CB250244 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 56/150 (37.33%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  106 TMFRIKDPKVSLDFYSRMLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAYERFERLGVEFAKKPDGGKLKG----VAFIKDPDDYWIEIFDLKT 543
            TM R+ D   S+ FY  +LGM LL+  + PE K++L FLGYED  SA               A IELT+NWG +       Y +G +    +GHI I VDD+Y   E     G    +  + G +KG    +AF++DPD Y IE  + K+
Sbjct:    6 TMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESA---------------AEIELTYNWGVDK------YEHGTA----YGHIAIGVDDIYATCEAVRASGGNVTR--EAGPVKGGSTVIAFVEDPDGYKIEFIENKS 128          
The following BLAST results are available for this feature:
BLAST of CB250244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
LGUL_PSEPU3.051e-4051.57Lactoylglutathione lyase OS=Pseudomonas putida GN=... [more]
LGUL_YEAST1.570e-2845.33Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
LGUL_SCHPO1.244e-2536.11Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
LGUL_NEIMB3.877e-1940.00Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA3.877e-1940.00Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_SYNY33.629e-1736.24Probable lactoylglutathione lyase OS=Synechocystis... [more]
LGUL_VIBCH6.190e-1736.24Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_SALTY1.056e-1635.95Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.056e-1635.95Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_HAEIN1.801e-1637.33Lactoylglutathione lyase OS=Haemophilus influenzae... [more]

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Properties
Property NameValue
Genbank descriptionEST0006 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ006 similar to lactolylglutathione lyase (acc# O49818), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250244 ID=CB250244; Name=CB250244; organism=Citrus sinensis; type=EST; length=710bp
CGGTTGCTTTCAATGGCTTCTTCGGAGCCCAAAGAATCGCCCGCTAACAA
TCCGGGTCTTCACACCGCCCGTGATGAAGCTACCAACGGATACTTCATGC
AACAAACGATGTTTCGAATTAAGGACCCCAAAGTTAGTCTTGATTTCTAT
TCTCGTATGTTGGGCATGTCGCTACTAAAGAGGTTGGATTTTCCAGAAAT
GAAATTTAGCCTATACTTTTTGGGCTATGAGGATACTGCATCAGCTCCAG
CTGACCCTGTTGATAGAACTGTTTGGACTTTTGGGAAGCCAGCTACAATT
GAGCTGACTCATAACTGGGGAACTGAAAGTGATCCCGACTTCAAAGGTTA
TCACAATGGGAATTCAGAACCCCGTGGCTTTGGGCACATCGGCATCACTG
TTGATGATGTATATAAGGCATATGAGAGGTTTGAACGTCTAGGAGTGGAA
TTTGCAAAGAAACCAGATGGTGGAAAATTGAAAGGCGTAGCATTCATTAA
AGACCCTGATGACTATTGGATTGAAATCTTTGACCTCAAAACAATTGGAA
AAATTGGTGGTAGCACTTGATATGACATTGCACACTCAGGGAAGGCGGGA
TCCATTCATTGTAGTGTTTGATAAATTCTCTGTTGAATAGAACGTCTTCC
ATGAGACGCATTATGGACTGAAATACGATCGCAAATATGTTTCAAACTCC
GAAAGACTTG
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