CB250249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7371_ARATH (UPF0737 protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.555e-24 Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 134 DMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVN 328 +MPCV T GDGP+GKR++G LYRY GEEVRI+CVCHG FLSPA+FVKHAGG V HPL+HIVVN Sbjct: 273 EMPCVFTKGDGPNGKRVDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPHVDHPLRHIVVN 337
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7374_ARATH (UPF0737 protein AFP4 OS=Arabidopsis thaliana GN=AFP4 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 80 KPTVAKKGVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKG-EEVRIVCVCHGSFLSPAEFVKHAG-------GGDV-AHPLKHIVV 325 K V G+++A R++LEDMPCVST G DGKR+EGFLY Y EEV+IVCVCHGSFLSPAEFV+H G GGDV +PL+HIVV Sbjct: 223 KNNVENSGMEKA-RNILEDMPCVSTRDVGADGKRVEGFLYWYGGNKEEVKIVCVCHGSFLSPAEFVRHGGGTVSDDDGGDVMINPLRHIVV 312
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7374_MAIZE (UPF0737 protein 4 OS=Zea mays PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 101 GVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 343 G+ + R ++++MP V T G +G R+EGFLY+Y KGE VRIVC+CHGSFL+P+EFV+HAG G V +PL+HIVV+ P L Sbjct: 182 GMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGE-VRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVVSATPNL 260
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7373_MAIZE (UPF0737 protein 3 OS=Zea mays PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 101 GVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 343 G+ + R ++++MP V T G +G R+EGFLY+Y KGE VRIVC+CHGSFL+P+EFV+HAG G V +PL+HIVV+ P L Sbjct: 184 GMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGE-VRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVVSATPNL 262
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7372_MAIZE (UPF0737 protein 2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 101 GVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 343 G+ + R ++++MP V T G +G R+EGFLY+Y KGE VRIVC+CHGSFL+P+EFV+HAG G V +PL+HIVV+ P L Sbjct: 184 GMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGE-VRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVVSATPNL 262
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7371_MAIZE (UPF0737 protein 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 101 GVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 343 G+ + R ++++MP V T G +G R+EGFLY+Y KGE VRIVC+CHGSFL+P+EFV+HAG G V +PL+HIVV+ P L Sbjct: 315 GMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGE-VRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVVSATPNL 393 The following BLAST results are available for this feature:
BLAST of CB250249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB250249 ID=CB250249; Name=CB250249; organism=Citrus sinensis; type=EST; length=656bpback to top |