CB250257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49 Identity = 94/211 (44.55%), Postives = 133/211 (63.03%), Query Frame = 2 Query: 5 GVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQP--AEASCANADGSASGFILPNSCL 631 G+KV A SPNTDGIH+ S G+ I ++ + TGDDC+S+ +T + I N+ CGPGHGISIGSLGK + V+++TV + + T NGVRIK+W + SG I+F++ MNNV NPIIIDQ YC + C Q S + I ++ + + GTSA++ +K+ CS +PC I L+D+ L +N E+ C A GS+SG + P CL Sbjct: 215 GLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTW-QGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYGSSSGQVYPPPCL 424
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48 Identity = 98/204 (48.04%), Postives = 135/204 (66.18%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASGFILP 619 V V+A DSPNTDGIH+ + + + +S IGTGDDC+S+ G+ N+ I ++ CGPGHGISIGSLG + +A V VTV +GT NGVRIK++ + SG A NI+FQ+ M+NV NPIIIDQ+YC D C + S V++ +V+Y+DI GTSA+E + +CS PC GI L+ V N + +A+C NA+ G +LP Sbjct: 231 VVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPIIIDQDYC-DKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRV----NIKGGKATCTNANVVDKGAVLP 428
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48 Identity = 92/208 (44.23%), Postives = 128/208 (61.54%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNN-QPAEASCANADGSASGFILPNSC 628 +K+ A +SPNTDGIH+ S GV I+ S I TGDDC+S+G G N+ I+ + CGPGHGISIGSLGK Q E V+ + +++ T T T NG RIK+W G I F+ MNNV +PI+IDQ YCP N+ + S VK+S++ +++I GTSA +K CS +PC + L D+ + +N +PA + C N G + P C Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEPATSQCLNVKPITIGKLNPIPC 395
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.161e-47 Identity = 93/202 (46.04%), Postives = 125/202 (61.88%), Query Frame = 2 Query: 5 GVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGF-ARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASG 607 G ++A GDSPNTDGIH+ S+ V IL++ IGTGDDCVS+G G+ + ++ V CGPGHG+S+GSLGK E V+ +TV + T T T NGVRIK+W +I F+ M NV NP+IIDQ Y P N+ S +K+S + ++++ GTS T GV L CSS PC G+ L +V L +N P A C N +G Sbjct: 185 GFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAPTTAKCTNVKPLVTG 386
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.516e-47 Identity = 97/207 (46.86%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 5 GVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCA--NADGSASGFILP 619 G+ ++A DSPNTDGI + AS + + IGTGDDCV++G G++N+ IE++ CGPGHGISIGSLG+E A V V V F TQNG+RIK+W + SG A +I++++ M N +NPI+I+Q YC C Q S V+I DV Y++I GTSAT ++L CS PC I L D+ L + ASC NA+G SG ++P Sbjct: 221 GISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTW-QGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLKLTSGKI-ASCLNDNANGYFSGHVIP 425
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.516e-47 Identity = 98/207 (47.34%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSY-NNQPAEASCANADGSASGFILP 619 QG+K+ A DSPNTDGI + AS I IGTGDDC+++G G++N+ I+++ CGPGHGISIGSLG++ A V +V V F TQNG+RIK+W + SG A I +++ M N +NPI+I+Q YC C Q S V+I V Y++IHGTSAT ++L CS PCTGI L +V L + +PA NA G SG ++P Sbjct: 220 QGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTW-QGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIP 425
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47 Identity = 99/207 (47.83%), Postives = 125/207 (60.39%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQ--PAEASCANADGSASGFILPNSC 628 VSA +SPNTDGIHV SS V I DS TGDDC+SVG L+I V CGPGHGIS+GSLG E V V V + TFT T NGVRIK+W + G ++ F+ ++ NV NP++IDQ YCP N+ S VKIS V +Q+I GTS T+ V L S PC GI + D+ ++Y+ + PA++SC N S G P C Sbjct: 182 VSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKGKQNPPVC 388
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47 Identity = 94/192 (48.96%), Postives = 124/192 (64.58%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYN-NQPAEASCAN 586 V+A SPNTDGIH+ + + +++S IGTGDDC+S+ G+ + N+ CGPGHGISIGSLG EA V V V T NG+RIK+W + SG A+NI FQ+ +M+NV NPIIIDQ YC + CP Q S VK+S+V Y +I GTSA+EV VK DCS +PC G + ++ L N + SC+N Sbjct: 247 VTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTW-QGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINLVGNGGKETTMSCSN 437
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47 Identity = 97/203 (47.78%), Postives = 129/203 (63.55%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCP-DNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASGFILP 619 V+A DSPNTDGIHV + +TI S IGTGDDC+S+ G+ + ++ CGPGHGISIGSLG++ E V V V +GT NG+RIK+W + SG A NI+FQ+ MN+V NPIIIDQNYC ++C Q S V++ +V+YQ+I GTSA+ + L+CS PC GI L+ V+L Q A C N + G + P Sbjct: 261 VTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTW-KGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQL----QNGRAECNNVQPAYKGVVSP 458
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.677e-46 Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGF-ARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYN--NQPAEASCANADGSASGFILPNSC 628 V V+A GDSPNTDGIH+ SSGVTI ++ IG GDDC+S+GPG + + I V CGPGHGISIGSLG+ + E V ++ V T T NGVRIK++ +S A I +++ M + PIIID YCP+ AS V + DV +++I GTS+T V L C+++ PCTG++++DV + Y+ N A C NA GSA G + +C Sbjct: 200 VNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 409 The following BLAST results are available for this feature:
BLAST of CB250257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250257 ID=CB250257; Name=CB250257; organism=Citrus sinensis; type=EST; length=715bpback to top |