CB250279

Overview
NameCB250279
Unique NameCB250279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:110..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.065e-39
Identity = 88/222 (39.64%), Postives = 137/222 (61.71%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKK----GYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLG--FDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN-LSTGLKDVVWKS 647
            +Y+KI++ DFK P W S+ A++L++++LDPNP TRIT+ +V+++ WFKK        P         +DVD + ++S +                  +NAF +I+ S+G +LS LFE++    KRE RF + RP + +IS +EEAA  +G  FDV+K+  +++++G++ GRKG L+V  EIF VAPS  +VE++K  GDTLE++ F    L   LKD+ W S
Sbjct:  232 MYRKIYRGDFKCPGWLSSDARRLVTKLLDPNPNTRITIEKVMDSPWFKKQATRSRNEPVAATITTTEEDVDFLVHKSKEETE--------------TLNAFHIIALSEGFDLSPLFEEKKKEEKREMRFATSRPASSVISSLEEAAR-VGNKFDVRKSESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWTS 438          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.982e-38
Identity = 86/217 (39.63%), Postives = 130/217 (59.91%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSF---EQPNIDLDDVDSIFNESMDSRN-----------LVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN 611
            +YKKI++ +F+ P WFST   +L+S++L+ NP  R T  E++EN WFKKG+K   F   +    ++ D D + ++S++S             L   RR  G   P  +NAF++IS SQG +LS LF+         +RF S  PV++IISK+EE A  + F V+K + ++ L+G + G KG L++A EIFE+ PSL +VE++K GGD  E+  F  N
Sbjct:  234 MYKKIYRGEFRCPRWFSTELTRLLSKLLETNPEKRFTFPEIMENSWFKKGFKHIKFYVEDDKLCNVVDDDELESDSVESDRDSAASESEIEYLEPRRRVGGLPRPASLNAFDIISFSQGFDLSGLFDDD----GEGSRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKTEYEDFCNN 446          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.480e-37
Identity = 88/225 (39.11%), Postives = 131/225 (58.22%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETR-FTSKRPVNEIISKIEEAASPLGFDVKKNNFK--------LKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKS 647
            +YKKI   +FK P WF+  A+ LISR+LDPNP TRIT+ E++++ WFKKG+         + L++ +   N +M+ +             P  +NAF++IS SQG +LS +F       + + + F + +P   I+S++EE A    F VKK   K        +KLQG K GRKG L++  EIFEV+PS Y+VE++K+ GDTLE+  F  ++L   L D+ W S
Sbjct:  230 MYKKITNGEFKVPDWFTPDARSLISRLLDPNPTTRITIDELVKHPWFKKGHTKRPASSNTMKLNEEEKPANAAMNMK-------------PASLNAFDIISLSQGFDLSGMFCCHGHSSRTQDQLFVTGKPATAIVSRLEEIAETEHFTVKKKQKKRQEEDGMAVKLQGWKEGRKGQLAIDAEIFEVSPSCYVVEVKKTAGDTLEYQAFCNRDLRPSLNDICWTS 441          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 92/229 (40.17%), Postives = 136/229 (59.39%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKG--YKPPSFEQPNIDLDDVDS------------IFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKL-KLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 641
            +Y+KI KADFK+P WF+   ++L+ ++LDPNP TRIT+A + E+ WF+KG   K    E+   +++ V++              N +  S N      E     P  +NAF+LI+ S G +L+ LF       KRE+RFTS++P + IISK+EE A  L   ++K    L KL+  K GRKG LS+  EIF+V P+ ++VE++KS GDTLE+ K   ++L   L D+VW
Sbjct:  220 MYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPETRITIARIRESSWFRKGLHMKQKKMEKRVKEINSVEAGTAGTNENGAGPSENGAGPSENGDRVTEENHTDEPTNLNAFDLIALSAGFDLAGLFGDDN---KRESRFTSQKPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEVKKSNGDTLEYQKLVAEDLRPALSDIVW 445          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 87/230 (37.83%), Postives = 137/230 (59.57%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKP----------PSF-----EQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVK-KNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVW 641
            LY+ I +++++ PPWFS  A+KL++R+LDPNP TRIT++++++  WF++   P          PS      E      D+ D  F      R+ V+       V P  MNAF++IS S+GL+LS +F+ +    + E RF+++     I+SK+EE A    F  K K   +++L+G + GRKG L++  EIF+VAP +++VE+RK+GGD+ +F  FYK  L   L D+VW
Sbjct:  226 LYRNITESNYRCPPWFSVEARKLLARLLDPNPKTRITISKIMDRPWFQQATCPLGDMSLVASAPSVLLARKEASQQHDDEEDDGFAREKKKRSNVIMSSPVIDVRPSSMNAFDIISRSRGLDLSKMFDAEER--RSEARFSTRETTTAIVSKLEEIAEAGRFSFKLKEKGRVELEGSQDGRKGALAIEAEIFKVAPEVHVVEVRKTGGDSPDFRDFYKQELKPSLGDMVW 453          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36
Identity = 84/216 (38.89%), Postives = 130/216 (60.19%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELIST-SQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKK-NNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 641
            +Y+KIF+ADF+ PPWFS  A++LIS++L  +P  RI++  ++   W +K + PP   + +  +    S  NE  +       + E  P++P   NAFE IS+ S G +LSSLFE +    K ++ FTS+    E++ KIE     +   VK+  +FK+K++G+  GRKG LS+  E+FEVAP + +VE  KS GDTLE+ + Y + +   L D+VW
Sbjct:  221 MYRKIFRADFEFPPWFSPEARRLISKLLVVDPDRRISIPAIMRTPWLRKNFTPPLAFKIDEPICSQSSKNNEEEEEDGDCENQTE--PISPKFFNAFEFISSMSSGFDLSSLFESKR---KVQSVFTSRSSATEVMEKIETVTKEMNMKVKRTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVW 431          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK1_ARATH (CBL-interacting serine/threonine-protein kinase 1 OS=Arabidopsis thaliana GN=CIPK1 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35
Identity = 92/226 (40.71%), Postives = 133/226 (58.85%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGY---KPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGH--LSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDETIV 665
            LY+KI K D   P W S  A+ +I R+LDPNPVTRIT+  +  +EWFK  Y    P   ++  +D DD D+   + + S         +G  +P I+NAF+LI  S  L+LS  FE Q  + +R  RFTS     +++ KIE A + +GF V+K + KL+++ E+  +KG   LSV  E+FE+ PSL +VELRKS GD+  + + Y+ L   LKDV   S ++ IV
Sbjct:  229 LYQKICKGDPPIPRWLSPGARTMIKRMLDPNPVTRITVVGIKASEWFKLEYIPSIPDDDDEEEVDTDD-DAFSIQELGS------EEGKGSDSPTIINAFQLIGMSSFLDLSGFFE-QENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERL---LKDVGTSSPEQEIV 443          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.363e-35
Identity = 82/217 (37.79%), Postives = 133/217 (61.29%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPP-SFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELIST-SQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKN-NFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 641
            +Y+KIFK++F+ PPWFS  +K+LIS++L  +P  RI++  ++   WF+K    P  F+   +++ +V+    +   +           PV+P   NAFE IS+ S G +LSSLFE +    K  + FTS+   +EI+ K+E     +   VK+  +FK+KL G+  GRKG ++V  E+FEVAP + +VEL KS GDTLE+++ Y +++   L+++VW
Sbjct:  251 MYRKIFKSEFEYPPWFSPESKRLISKLLVVDPNKRISIPAIMRTPWFRKNINSPIEFKIDELEIQNVE----DETPTTTATTATTTTTPVSPKFFNAFEFISSMSSGFDLSSLFESKR---KLRSMFTSRWSASEIMGKLEGIGKEMNMKVKRTKDFKVKLFGKTEGRKGQIAVTAEVFEVAPEVAVVELCKSAGDTLEYNRLYEEHVRPALEEIVW 460          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.264e-35
Identity = 91/236 (38.56%), Postives = 136/236 (57.63%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPN-------IDLDDVDSIFNESMDSRNLVVE----------RREEGPV-APLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTG-RKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKSG 650
            +YKKI++ DF+ P WF     +L+ R+L+  P  R TM +++E  WFKKG+K   F   +        D D+++SI  ES+  R+  V           RR  G +  P  +NAF+LIS S G +LS LFE         +RF S  PV +IISK+EE A  + F V+K + K+ L+G + G  KG LS+A EIFE+ P+L +VE++K GGD +E+ +F  K L   L+++  ++G
Sbjct:  236 MYKKIYRGDFRCPRWFPVEINRLLIRMLETKPERRFTMPDIMETSWFKKGFKHIKFYVEDDHQLCNVADDDEIESI--ESVSGRSSTVSEPEDFESFDGRRRGGSMPRPASLNAFDLISFSPGFDLSGLFEDD----GEGSRFVSGAPVGQIISKLEEIARIVSFTVRKKDCKVSLEGSREGSMKGPLSIAAEIFELTPALVVVEVKKKGGDKMEYDEFCNKELKPKLQNLSSENG 465          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKC_ORYSJ (CBL-interacting protein kinase 12 OS=Oryza sativa subsp. japonica GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 89/253 (35.18%), Postives = 136/253 (53.75%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFE----------------------QPNIDL----------DDVDSIFNESMDS-------RNLVVERREEGPVA-PLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVV 638
            LY+KI+  +F+ P WFS    +LI+R+LD NP TRIT+ E+IE++WFKKGYKP  F                        P + L          DD D   +ES  S        +    +R  G +  P  +NAF++IS S+G NLS LFE++      E RF S  P+++I+ K+EE A    F V++ ++++ ++G + G KG L++  EIFE+ PSL +VE+++  GD  E+  F    L  G++ +V
Sbjct:  254 LYRKIYNGEFRCPRWFSKDFTRLITRLLDANPKTRITVPEIIESDWFKKGYKPVKFYIEDDKLYNLSDDVLNLEPADPVPPPLGLAPPVPPPPQGDDPDGSGSESDSSVVSCPATLSTGESQRVRGSLPRPASLNAFDIISFSKGFNLSGLFEER----GNEIRFVSGEPMSDIVKKLEEIAKVKSFTVRRKDWRVSIEGTREGVKGPLTIGAEIFELTPSLVVVEVKRKAGDNEEYEDFCNMELKPGMQHLV 502          
The following BLAST results are available for this feature:
BLAST of CB250279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CIPK6_ARATH2.065e-3939.64CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPKC_ARATH2.982e-3839.63CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKK_ORYSJ1.480e-3739.11CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPKA_ARATH4.306e-3740.17CBL-interacting serine/threonine-protein kinase 10... [more]
CIPKU_ORYSJ7.345e-3737.83CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPK5_ARATH2.137e-3638.89CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPK1_ARATH1.809e-3540.71CBL-interacting serine/threonine-protein kinase 1 ... [more]
CIPKP_ARATH2.363e-3537.79CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKJ_ARATH5.264e-3538.56CBL-interacting serine/threonine-protein kinase 19... [more]
CIPKC_ORYSJ2.613e-3435.18CBL-interacting protein kinase 12 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionEST0053 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ069 similar to serine/threonine protein kinase (acc# AAG50566), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250279 ID=CB250279; Name=CB250279; organism=Citrus sinensis; type=EST; length=731bp
CTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCTCCATGGTTC
TCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCCTAATCCTGT
GACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGTTTAAGAAGG
GATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTTGATGATGTG
GATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGTTGTGGAGAG
GCGAGAAGAAGGCCCTGTTGCACCTCTCATTATGAATGCGTTTGAGTTGA
TCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAAAAGCAAATG
GGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCCTGTTAACGA
AATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTTTTGATGTGA
AGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACTGGACGCAAG
GGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACTTTA
CATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAATTTCACAAGT
TTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGGAAATCAGGA
GATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGCAGGGTCTCA
ATAGCGGATTTCCTTTCATGACTTGCACTGC
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