CB250279

Overview
NameCB250279
Unique NameCB250279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:110..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30
Identity = 79/204 (38.73%), Postives = 120/204 (58.82%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKK--NNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK 608
            LYKKI KA+ K P W +  AK+L+ RILDPNP TR++  +++++ WF+KG +    E+    +++   +  E+  + +   E++       + +NAFE+IS S G +LS LFEK  G  K E RFTS R  +EI  K+ E    L   V+K  + +++K+  E T       V  E+FE+APS +MV L+KSGGDT E+ +  K
Sbjct:  220 LYKKIGKAEVKFPNWLAPGAKRLLKRILDPNPNTRVSTEKIMKSSWFRKGLQ----EEVKESVEEETEVDAEAEGNASAEKEKKR-----CINLNAFEIISLSTGFDLSGLFEK--GEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEAT------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMK 406          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.289e-30
Identity = 86/243 (35.39%), Postives = 129/243 (53.09%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKK-------------GYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERRE------------EGPVAPLI---MNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVW 641
            +Y+KI KA++K P  FS   K L+ +ILDP+P TRI++ ++  + W++K             G K    E    D  +          SR+ V    E            +G  A L    +NAF++IS S G +LS+LFE++ G  +RE RFT+++P   I +K+ E A      + KK N  L+L   K G KG L +  E+FE+APS ++VE +KS GDT+E+ K  K ++   LKD+VW
Sbjct:  220 MYRKIAKAEYKCPRSFSAELKDLLYKILDPDPSTRISIPKIKRSAWYRKSSDVNALKSKHETGDKVYKGEATTSDTTECSIFEGNRASSRDKVYTNGEATTSDSPECSNSDGKQASLSLPNLNAFDIISLSTGFDLSNLFEERYG--RREERFTTRQPAAAIFAKLNELARRFKLKIKKKENGVLRLVAPKEGIKGLLELDAEVFELAPSFHLVEFKKSNGDTIEYQKLMKEDIRPALKDIVW 460          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30
Identity = 75/214 (35.05%), Postives = 124/214 (57.94%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVV 638
            +Y+KI   +F+ P WFS   +KL+ +I+DPNP TRI++ ++ E+ WF+KG +     +     ++        +  R       +  P++   +NAFE+IS S+G +LS +F  +    + E RFTS +  + IISK+E+ A  L   V KK+N  +K+QG K GR G L    EIFEV  S +++E++++ GD+LE+ +   + +   LKD+V
Sbjct:  221 MYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVAPVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIVKEW--RNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIV 432          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30
Identity = 79/222 (35.59%), Postives = 128/222 (57.66%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVV--WKSGDE 656
            +Y+KI   +F+ P WFS   +KL+ +I+DPNP TRI++ ++ E+ WF+KG +     +     ++        +  R       +  P++   +NAFE+IS S+G +LS +F  +    + E RFTS +  + IISK+E+ A  L   V KK+N  +K+QG K GR G L    EIFEV  S +++E++++ GD+LE+ +   + +   LKD+V  W  GDE
Sbjct:  221 MYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVALVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIVKEW--RNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLAW-HGDE 439          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 81/223 (36.32%), Postives = 129/223 (57.85%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVV--ERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVWK-SGDE 656
            +Y+KI KA+++ P  FS   K+L+  ILDP+P TR++++ +  + W++   KP +    N +                + +  ER +E P     +NAF++IS S G +LS LF ++ G  +RE+ FTS++P   ++ K++E A  L   V K +N  LKL   K GRKG L +  E+ EVAP L +VEL+K+ GDTLE+ +  K ++   LKD++W   GD+
Sbjct:  219 MYRKIAKAEYRCPRHFSAELKELLYGILDPDPSTRMSISRIKRSAWYR---KPIAISALNNETGKKSCTSEAPFSGPTICISSERNQEPPNLH-NLNAFDIISLSTGFDLSGLFGERYG--RRESLFTSRKPAAAVLVKLKELAKALNLKVTKTDNGVLKLATTKEGRKGRLELDAEVSEVAPFL-LVELKKTNGDTLEYQRMMKEDIRPSLKDIIWTWQGDQ 434          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28
Identity = 76/215 (35.35%), Postives = 120/215 (55.81%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLI--MNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLK---LQGEKTGRKGH--LSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGL 626
            LY+KI K D + P W S  A+ ++ +ILDPNP+TR+ +  +  +EWF++ Y P       +  DD D   + ++   NL +   ++   +P I  +NAF+LI  S  L+LS  FEK+  + +R+ RF S      +  KIE   +  GF V+KN+ KLK   +  E    +GH  L ++ E+FE+  SLY+VEL++S GD   + +   +LS  L
Sbjct:  296 LYQKILKGDARIPKWLSPGAQDILRKILDPNPITRLDITGIRAHEWFRQDYTPA------MPFDDDD---DNNISDGNLHMTENQDIETSPAISQINAFQLIGMSSCLDLSGFFEKE-DVSERKIRFVSNYSPTSLFEKIESTVTEKGFQVQKNSGKLKVIQVCKEPANPRGHGNLLISAEVFEINESLYVVELKRSSGDCSLYRQLCASLSEDL 500          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKL_ARATH (CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26
Identity = 77/209 (36.84%), Postives = 120/209 (57.42%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAE-VIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKK-NNFKLKLQ-GEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLST 620
            LYKKI +AD+  PP F+   K+LI  ILDPNP++RIT+AE +I++ WFK GY P   +  +   D+V  I N +  S N +              NAF++I+ S  L+LS LFE+     + +TR  SK    E I KIE AA+ +   V++  +FK+K+Q  E   R  +  ++ E+ EV P+  ++E+ KS G+   + +F ++LS+
Sbjct:  217 LYKKILRADYTFPPGFTGEQKRLIFNILDPNPLSRITLAEIIIKDSWFKIGYTPVYHQLSDSIKDNVAEI-NAATASSNFI--------------NAFQIIAMSSDLDLSGLFEENDD-KRYKTRIGSKNTAQETIKKIEAAATYVSLSVERIKHFKVKIQPKEIRSRSSYDLLSAEVIEVTPTNCVIEISKSAGELRLYMEFCQSLSS 409          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKP_ORYSJ (CBL-interacting protein kinase 25 OS=Oryza sativa subsp. japonica GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 74/261 (28.35%), Postives = 127/261 (48.66%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFE---------------QPNIDLDDVDSIFNESMDSRNLVV-------------------ERREEGPVAPL--------------IMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN-LSTGLKDVV 638
            LY+ I +  F+ PP FS    +L+ R+L P+P  RIT+ E++E  WFK+G+K  ++                +P +   D D+I + S       V                   +R E+    PL               +NAF++I++S   +LS LFE++        RF S  PV +II+K++E A  + F  +  + ++ ++  + G+KG L+++ ++FE+   L MV++ K  GDT E+ +F  N L  GL+ +V
Sbjct:  235 LYRLIGQNQFQCPPSFSPDLARLVRRLLQPDPDRRITIPEIMEMRWFKRGFKEVTYYIDSNDRLRSLDGLDGEPELYDSDTDTIESSSSSESPTPVAGTPRGMHTSVSAPALSELDRMEDSASLPLPLPLPPRPRMPRPKSLNAFDIIASSPSFDLSGLFEER----GERMRFVSGAPVADIIAKLQEIAGMVSFTARTKDCQVSIEATRNGQKGALAISAKVFELTRELVMVQVCKKAGDTAEYRRFCDNELKAGLRGLV 491          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKD_ORYSJ (Putative CBL-interacting protein kinase 13 OS=Oryza sativa subsp. japonica GN=CIPK13 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 80/262 (30.53%), Postives = 128/262 (48.85%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPN------IDLDD---VDSIFN--------ESMDSRNLVVERREEGPV-----APLIM----------------NAFELISTSQGLNLSSLFEKQMG----------LVKRETRFTSKRPVNEIISKIEEAASPLGFDVK-KNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVV 638
            +Y+KI K DF+ P WFS    +L+  +L  NP  R T   ++ENEWFK G++  SF   +       +LDD   VD+  +        +S D        R+ G +     AP ++                NAF++IS S G +LS LF++  G            K   RF S  PV  I++ +E AA+  G  V+ + +  + ++G + G  G L+VA EI+E+ P L +VE+R+  G   E+ +F++  L   L+++V
Sbjct:  233 MYRKIHKGDFRCPKWFSPELIRLLRGVLVTNPQRRATAEGIMENEWFKIGFRRFSFRVEDDRTFTCFELDDDAAVDAPTSPPDTPRTVDSGDVGAAPTRPRKAGSLTSCDSAPSLLEGRFGLGGSSRRRSSLNAFDIISFSPGFDLSGLFDQDDGGGAGAGSIPEQQKHTARFVSAAPVEVIVATLEAAAAAAGMAVREREDGSISMEGTREGEHGALAVAAEIYELTPELVVVEVRRKAGGAAEYEEFFRARLKPSLRELV 494          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKR_ORYSJ (Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 71/221 (32.13%), Postives = 110/221 (49.77%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRE-------TRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 641
            +Y+K+ + DF  PPW +T A+KLI  +LDPNP TRIT+A ++E  WF+K    P      I  D   +     +D+R    + ++E P    ++NAF LIS S+G +LS LFE                TRF ++   + +++++E  A               + G +               VAPSL MV+++K GGD +E+  F+ + L   LKD+VW
Sbjct:  220 MYRKMRRGDFCCPPWVTTDARKLIKSLLDPNPGTRITVAGLLETPWFRKTAPVPR----PIIADPAAA----PVDTRGNAGDDKDEPPE---VLNAFHLISLSEGFDLSPLFEHDPAASPGRATARAGGTRFATREAASGVVARLEALA---------------MGGAR---------------VAPSLLMVDVKKDGGDAMEYRPFFSEELRPALKDIVW 399          
The following BLAST results are available for this feature:
BLAST of CB250279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CIPKF_ARATH1.342e-3038.73CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKQ_ORYSJ2.289e-3035.39CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKF_ORYSJ2.989e-3035.05CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CIPKE_ORYSJ2.989e-3035.59CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKS_ORYSJ3.305e-2936.32CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKL_ORYSJ4.772e-2835.35CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPKL_ARATH9.951e-2636.84CBL-interacting serine/threonine-protein kinase 21... [more]
CIPKP_ORYSJ1.100e-2428.35CBL-interacting protein kinase 25 OS=Oryza sativa ... [more]
CIPKD_ORYSJ9.314e-2430.53Putative CBL-interacting protein kinase 13 OS=Oryz... [more]
CIPKR_ORYSJ5.111e-2232.13Putative CBL-interacting protein kinase 27 OS=Oryz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0053 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ069 similar to serine/threonine protein kinase (acc# AAG50566), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250279 ID=CB250279; Name=CB250279; organism=Citrus sinensis; type=EST; length=731bp
CTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCTCCATGGTTC
TCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCCTAATCCTGT
GACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGTTTAAGAAGG
GATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTTGATGATGTG
GATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGTTGTGGAGAG
GCGAGAAGAAGGCCCTGTTGCACCTCTCATTATGAATGCGTTTGAGTTGA
TCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAAAAGCAAATG
GGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCCTGTTAACGA
AATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTTTTGATGTGA
AGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACTGGACGCAAG
GGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACTTTA
CATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAATTTCACAAGT
TTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGGAAATCAGGA
GATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGCAGGGTCTCA
ATAGCGGATTTCCTTTCATGACTTGCACTGC
back to top