CB250282

Overview
NameCB250282
Unique NameCB250282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 54/170 (31.76%), Postives = 95/170 (55.88%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFI-YSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516
            F  + K G+  ++ + N L++ LC   ++ +A E+   MN   + PDS TY+IL +G+     +  A E+ R+M+D G +PD++TY I++   C+ G +D  L ++K M S   +  S I  SV++       RI++A+  F +M+ +G+  D+  Y+ +I   CK  KF
Sbjct:  259 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 428          

HSP 2 Score: 74.7146 bits (182), Expect = 2.958e-13
Identity = 48/176 (27.27%), Postives = 88/176 (50.00%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMND-RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNV 525
            A+  FN M+  G++ +L A++ ++  LCK      A  ++D M D R +P+S+T+  LL G  +   L  AR +   ++ +G   DIV Y I++D   K+G ++EAL + K +      P+   ++ L++ Y     I +A      ++  G+   V  Y  L+ A+      K++
Sbjct:  396 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 571          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 1
Query:   31 YGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            YG+  +L  +N ++  LC+S +   +  I   M  ++I P + ++ ++++G+ K+      R++ R M + G +  + TY IM+  LCK  +  EA  ++  + S   +P S  YS+L+H +  E  +++A++ F  M  NG + D   Y  LI   CK   F+
Sbjct:  176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFE 339          

HSP 2 Score: 72.4034 bits (176), Expect = 1.468e-12
Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = 1
Query:   19 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD-CMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGA 495
            +M ++GV   +A +N ++  LCK K   +A+ + D  M+ R  P+S TYS+L+ G+  + NL  A  +F  MV  G  PD   Y  ++  LCK G  + AL + +        P+  +   LV+     +++++A +  + + K     +V ++N +  A
Sbjct:  242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKE-LIAVVKEKFTRNVDLWNEVEAA 400          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSK-TYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504
            + M   G   N   ++ L+  LCK   + +AQE+   M++   P +  TYS L++ + K      A ++  +M++  C P++V Y  M+D LCK G+ DEA  +++ M+   CQP    Y+ ++  +G+  +IE  ++    M   G+  +   Y  LI   CK
Sbjct:  663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826          

HSP 2 Score: 83.1889 bits (204), Expect = 8.318e-16
Identity = 52/184 (28.26%), Postives = 81/184 (44.02%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSK----------------TYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            F  M   G   N+  ++ L+   CK+  V KA +IF+ M   + +PD                  TY  LL+G+ K   +  AR++   M   GC P+ + Y  ++D LCK G++DEA  +   M       T + YS L+  Y    R + A     +M +N    +V +Y  +I   CK  K
Sbjct:  576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759          

HSP 3 Score: 82.8037 bits (203), Expect = 1.086e-15
Identity = 51/168 (30.36%), Postives = 76/168 (45.24%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            ++ M   GV  N    +     LC +    KA  +  + +   FIPD+ TYS +L        +  A  +F EM   G   D+ TY IMVD  CKAG +++A      M  + C P    Y+ L+H Y    ++  A + F  M   G   ++  Y+ALI   CKA +
Sbjct:  436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603          

HSP 4 Score: 72.7886 bits (177), Expect = 1.124e-12
Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 1
Query:   34 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMN-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEM----------------EKNGIQADVAMYNALIGAFCKANK 513
            G   + + ++ +L+ LC +  +  A  +F+ M     + D  TY+I+++ + K   + +AR+ F EM + GC P++VTY  ++    KA +V  A  + ++M S  C P    YS L+  +    ++E A   F  M                + N  + +V  Y AL+  FCK+++
Sbjct:  478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654          

HSP 5 Score: 71.633 bits (174), Expect = 2.505e-12
Identity = 44/159 (27.67%), Postives = 73/159 (45.91%), Query Frame = 1
Query:   46 NLAAFNGLLSALCKSKNVRKAQEIFDCMN-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            N+  +  LL   CKS  V +A+++ D M+ +   P+   Y  L++G  K   L  A+E+  EM + G    + TY  ++D   K  R D A  ++  M    C P   IY+ ++       + ++A      ME+ G Q +V  Y A+I  F    K +
Sbjct:  638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 47/167 (28.14%), Postives = 85/167 (50.90%), Query Frame = 1
Query:   16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            N  + +G+T N+   N L+ ALCK  ++  A ++ D +     +P+  TY+ +L G+    ++  A+ +  EM+D G  PD  TY +++D  CK GR  EA  ++  M+    +P    Y V++     E +  +A + F EM +     D ++   +I A C+ +K
Sbjct:  180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346          

HSP 2 Score: 73.9442 bits (180), Expect = 5.046e-13
Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 1
Query:   67 LLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504
            L+   CK     +A  + D M    I P+  TY +++    K+     AR +F EM++    PD      ++D LC+  +VDEA G+ + M    C P + + S L+H    E R+ +A   F E EK  I + +  YN LI   C+
Sbjct:  267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPS-LLTYNTLIAGMCE 412          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 1
Query:   16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKA 507
            N M + G   ++  +N +L  LCK K + +A ++F+ M +R + PDS T +IL++G  K  NL  A E+F++M +     D+VTY  ++D   K G +D A  I   M S    PT   YS+LV+    +  + +A   + EM    I+  V + N++I  +C++
Sbjct:  434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598          

HSP 2 Score: 84.3445 bits (207), Expect = 3.734e-16
Identity = 47/165 (28.48%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504
            F+ M+   V  +L  F+ ++S   +S N+ KA   F+ + +   IPD+  Y+IL++G+ +   +  A  +  EM+  GC  D+VTY  ++  LCK   + EA  +   M      P S+  ++L+  +     +++A++ F +M++  I+ DV  YN L+  F K
Sbjct:  363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527          

HSP 3 Score: 78.5666 bits (192), Expect = 2.049e-14
Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = 1
Query:   16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504
            N M   G +  +  +N +++ LCK     +A+E+F + +     PDS TY  LL    K  ++    ++F +M      PD+V +  M+ +  ++G +D+AL    S+      P + IY++L+  Y  +  I  A++   EM + G   DV  YN ++   CK
Sbjct:  294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457          

HSP 4 Score: 77.0258 bits (188), Expect = 5.961e-14
Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504
            FN M +  +  +      L+   CK  N++ A E+F  M ++ I  D  TY+ LL+G+GK  ++  A+EI+ +MV     P  ++Y I+V+ LC  G + EA  +   M S   +PT  I + ++  Y       D      +M   G   D   YN LI  F +
Sbjct:  468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632          

HSP 5 Score: 68.9366 bits (167), Expect = 1.623e-11
Identity = 42/176 (23.86%), Postives = 83/176 (47.16%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTF--LEMEKNGIQADVAMYNALIGAFCKANKFK 519
            A+  F  M++  +  ++  +N LL    K  ++  A+EI+ D ++   +P   +YSIL+       +L  A  ++ EM+     P ++    M+   C++G   +    ++ M S    P    Y+ L++ +  E  +  A      +E E+ G+  DV  YN+++  FC+ N+ K
Sbjct:  499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMN---DRFIPDSKTYSILLEGWGK-----------DPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 453
            A+ TF  M++Y    ++ A+N +++ALC+  N +KA+ + D M     R+ PD+ TY+IL+  + +              +  A  +FREM+  G  PD+VTY  ++D  CK  R+  AL + + M +  C P    Y+  +  Y V N IE A++    M+K G
Sbjct:  184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18
Identity = 53/170 (31.18%), Postives = 89/170 (52.35%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKA 507
            A+  FN MQ+ G   +   +  L+    K+  +  A +++  M    + PD+ TYS+++   GK  +LP A ++F EMVD GC P++VTY IM+D+  KA     AL + + M +   +P    YS+++   G    +E+A   F EM++     D  +Y  L+  + KA
Sbjct:  418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587          

HSP 2 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 44/156 (28.21%), Postives = 79/156 (50.64%), Query Frame = 1
Query:   58 FNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522
            +  ++  L ++K      ++ D M  D   P++ TY+ L+  +G+   L  A  +F +M + GC PD VTY  ++D+  KAG +D A+ + + M +    P +F YSV+++  G    +  A   F EM   G   ++  YN ++    KA  ++N
Sbjct:  367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522          

HSP 3 Score: 77.0258 bits (188), Expect = 5.961e-14
Identity = 47/172 (27.33%), Postives = 90/172 (52.33%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            A+  +  MQ  G++ +   ++ +++ L K+ ++  A ++F  M D+   P+  TY+I+++   K  N   A +++R+M + G  PD VTY I+++VL   G ++EA  +   M      P   +Y +LV  +G    +E A   +  M   G++ +V   N+L+  F + NK
Sbjct:  453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624          

HSP 4 Score: 71.2478 bits (173), Expect = 3.271e-12
Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALI 489
            F  M   G T NL  +N ++    K++N + A +++ D  N  F PD  TYSI++E  G    L  A  +F EM      PD   YG++VD+  KAG V++A    ++M     +P     + L+ T+   N+I +A +    M   G++  +  Y  L+
Sbjct:  492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP339_ARATH (Pentatricopeptide repeat-containing protein At4g26800 OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            AVY    M+K G+ +++     L+  LCK++ V  A E+   M DR I P+  TYS L+ G  K   L  A     EM     NP+++T+  ++D   K G++ +   + K M  M   P  F YS L++   + NR+++A+     M   G   +V  Y+ L   F K+++
Sbjct:  177 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348          

HSP 2 Score: 87.8113 bits (216), Expect = 3.377e-17
Identity = 45/165 (27.27%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            M+  G++ N+  ++ L++ LCKS  +  A+     M+ + I P+  T+S L++ + K   L +   +++ M+    +P++ TY  ++  LC   RVDEA+ ++  M S  C P    YS L + +   +R++D +    +M + G+ A+    N LI  + +A K
Sbjct:  219 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383          

HSP 3 Score: 72.4034 bits (176), Expect = 1.468e-12
Identity = 43/165 (26.06%), Postives = 79/165 (47.88%), Query Frame = 1
Query:   22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            M K G+  ++   + L++  C S +++ A  +   M    I  D    +IL++   K+  +  A E+ + M D G +P++VTY  ++  LCK+GR+ +A   +  MDS    P    +S L+  Y    ++      +  M +  I  +V  Y++LI   C  N+
Sbjct:  149 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 313          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18
Identity = 42/163 (25.77%), Postives = 86/163 (52.76%), Query Frame = 1
Query:   34 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            G+  ++ ++N ++  LCK++ +  A      M DR I P+  T++  L G+    ++ +   +  +++  G  PD++T+ ++++ LC+A  + +A    K M     +P    Y++L+ +       + +V  F +M++NG+  D+  YNA I +FCK  K K
Sbjct:  420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVK 582          

HSP 2 Score: 70.4774 bits (171), Expect = 5.579e-12
Identity = 38/149 (25.50%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   31 YGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI----PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQAD 465
            +G   ++  F+ +++ LC++K ++ A   FDC  +       P+  TY+IL+       +  R+ ++F +M + G +PD+  Y   +   CK  +V +A  ++K+M  +  +P +F YS L+       R  +A + F  +E++G   D
Sbjct:  489 HGFKPDVITFSLIINCLCRAKEIKDA---FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634          

HSP 3 Score: 69.707 bits (169), Expect = 9.517e-12
Identity = 39/165 (23.64%), Postives = 79/165 (47.88%), Query Frame = 1
Query:   22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD-CMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            MQ  G++ NL  FN  LS      +V+K   + +  +   F PD  T+S+++    +   +  A + F+EM++ G  P+ +TY I++   C  G  D ++ +   M      P  + Y+  + ++    +++ A +    M + G++ D   Y+ LI A  ++ +
Sbjct:  451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615          
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18
Identity = 51/168 (30.36%), Postives = 92/168 (54.76%), Query Frame = 1
Query:   22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIF-REMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            M K G   ++ +++ +++ L K+  +  A E+FD M++R + PD   Y+IL++G+ K+ +   A E++ R + D+   P++ T+ IM+  L K GRVD+ L I + M     +   + YS L+H       ++ A   F E+++     DV  YN ++G FC+  K K
Sbjct:  175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342          

HSP 2 Score: 81.2629 bits (199), Expect = 3.161e-15
Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   55 AFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            A+  ++  LCK K + +A  +   M+   +  +S   + L+ G  +D  L  A    REM   GC P +V+Y I++  LCKAG+  EA   VK M     +P    YS+L+     + +I+ A++ + +  ++G++ DV M+N LI   C   K
Sbjct:  431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584          

HSP 3 Score: 79.7221 bits (195), Expect = 9.197e-15
Identity = 44/168 (26.19%), Postives = 84/168 (50.00%), Query Frame = 1
Query:    1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQE-IFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFC 501
            A +    M K G    + ++N L+  LCK+    +A   + + + + + PD KTYSILL G  +D  +  A E++ + + +G   D++ + I++  LC  G++D+A+ ++ +M+   C      Y+ L+  +        A   +  M K G+Q D+  YN ++   C
Sbjct:  483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650          

HSP 4 Score: 77.411 bits (189), Expect = 4.564e-14
Identity = 42/167 (25.15%), Postives = 90/167 (53.89%), Query Frame = 1
Query:   13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513
            FN + +   + ++  +N +L   C+   ++++ E++  M  +   +  +Y+IL++G  ++  +  A  I+R M   G   D  TYGI +  LC  G V++ALG+++ ++S       + Y+ ++     + R+E+A +   EM K+G++ +  + NALIG   + ++
Sbjct:  313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479          

HSP 5 Score: 77.0258 bits (188), Expect = 5.961e-14
Identity = 46/158 (29.11%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   46 NLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516
            N+ ++N L+  L ++  + +A  I+  M  + +  D  TY I + G   +  + +A  + +E+  +G + D+  Y  ++D LCK  R++EA  +VK M     +  S + + L+     ++R+ +A     EM KNG +  V  YN LI   CKA KF
Sbjct:  358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515          

HSP 6 Score: 68.9366 bits (167), Expect = 1.623e-11
Identity = 42/160 (26.25%), Postives = 82/160 (51.25%), Query Frame = 1
Query:   43 QNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            ++L  ++ L+  LC + NV KA+ +F+ +++R    D  TY+ +L G+ +   +  + E++R M     + +IV+Y I++  L + G++DEA  I + M +         Y + +H   V   +  A+    E+E +G   DV  Y ++I   CK  + +
Sbjct:  288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446          

HSP 7 Score: 68.1662 bits (165), Expect = 2.769e-11
Identity = 37/140 (26.43%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  100 RKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519
            ++ +EIF C      P  ++Y+ LL  + +     +   +F      G  P++ TY +++ + CK    ++A G +  M     +P  F YS +++      +++DA++ F EM + G+  DV  YN LI  F K    K
Sbjct:  102 KRMREIFGCE-----PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236          
The following BLAST results are available for this feature:
BLAST of CB250282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
PPR41_ARATH5.210e-1831.76Putative pentatricopeptide repeat-containing prote... [more]
PPR33_ARATH5.210e-1828.05Pentatricopeptide repeat-containing protein At1g11... [more]
PPR18_ARATH5.210e-1828.66Pentatricopeptide repeat-containing protein At1g06... [more]
PP388_ARATH5.210e-1828.14Pentatricopeptide repeat-containing protein At5g16... [more]
PP360_ARATH5.210e-1832.12Pentatricopeptide repeat-containing protein At5g01... [more]
PP130_ARATH5.210e-1831.52Pentatricopeptide repeat-containing protein At1g77... [more]
PPR49_ARATH6.805e-1831.18Pentatricopeptide repeat-containing protein At1g18... [more]
PP339_ARATH6.805e-1830.23Pentatricopeptide repeat-containing protein At4g26... [more]
PP239_ARATH8.887e-1825.77Putative pentatricopeptide repeat-containing prote... [more]
PP221_ARATH8.887e-1830.36Pentatricopeptide repeat-containing protein At3g09... [more]

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Properties
Property NameValue
Genbank descriptionEST0058 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ074 similar to hypothetical Arabidopsis protein (acc# F96802), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250282 ID=CB250282; Name=CB250282; organism=Citrus sinensis; type=EST; length=525bp
GCAGTTTACACATTTAATGTCATGCAGAAATATGGCGTCACCCAAAATTT
AGCAGCATTCAATGGGCTACTGAGTGCTTTATGCAAGTCCAAGAATGTGA
GGAAGGCTCAGGAGATATTTGACTGTATGAATGATCGGTTCATTCCTGAC
TCAAAAACTTATAGTATACTACTTGAGGGGTGGGGAAAGGATCCAAATTT
GCCCAGGGCAAGAGAAATTTTCAGAGAAATGGTTGATACAGGCTGCAACC
CTGATATAGTAACCTATGGTATAATGGTTGACGTTCTCTGTAAGGCAGGG
CGGGTTGATGAAGCTCTTGGGATAGTCAAGTCGATGGATTCTATGGTTTG
TCAGCCAACTTCTTTCATCTATAGCGTTTTAGTTCATACATACGGGGTAG
AGAACCGGATTGAGGATGCTGTTGATACATTCTTAGAGATGGAGAAGAAT
GGAATTCAGGCTGATGTTGCAATGTATAATGCCTTGATTGGTGCCTTCTG
TAAAGCTAATAAATTCAAAAATGTG
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