CB250282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 54/170 (31.76%), Postives = 95/170 (55.88%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFI-YSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516 F + K G+ ++ + N L++ LC ++ +A E+ MN + PDS TY+IL +G+ + A E+ R+M+D G +PD++TY I++ C+ G +D L ++K M S + S I SV++ RI++A+ F +M+ +G+ D+ Y+ +I CK KF Sbjct: 259 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 428 HSP 2 Score: 74.7146 bits (182), Expect = 2.958e-13 Identity = 48/176 (27.27%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMND-RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNV 525 A+ FN M+ G++ +L A++ ++ LCK A ++D M D R +P+S+T+ LL G + L AR + ++ +G DIV Y I++D K+G ++EAL + K + P+ ++ L++ Y I +A ++ G+ V Y L+ A+ K++ Sbjct: 396 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 571
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 31 YGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 YG+ +L +N ++ LC+S + + I M ++I P + ++ ++++G+ K+ R++ R M + G + + TY IM+ LCK + EA ++ + S +P S YS+L+H + E +++A++ F M NG + D Y LI CK F+ Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFE 339 HSP 2 Score: 72.4034 bits (176), Expect = 1.468e-12 Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 19 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD-CMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGA 495 +M ++GV +A +N ++ LCK K +A+ + D M+ R P+S TYS+L+ G+ + NL A +F MV G PD Y ++ LCK G + AL + + P+ + LV+ +++++A + + + K +V ++N + A Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKE-LIAVVKEKFTRNVDLWNEVEAA 400
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSK-TYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 + M G N ++ L+ LCK + +AQE+ M++ P + TYS L++ + K A ++ +M++ C P++V Y M+D LCK G+ DEA +++ M+ CQP Y+ ++ +G+ +IE ++ M G+ + Y LI CK Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826 HSP 2 Score: 83.1889 bits (204), Expect = 8.318e-16 Identity = 52/184 (28.26%), Postives = 81/184 (44.02%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSK----------------TYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 F M G N+ ++ L+ CK+ V KA +IF+ M + +PD TY LL+G+ K + AR++ M GC P+ + Y ++D LCK G++DEA + M T + YS L+ Y R + A +M +N +V +Y +I CK K Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759 HSP 3 Score: 82.8037 bits (203), Expect = 1.086e-15 Identity = 51/168 (30.36%), Postives = 76/168 (45.24%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 ++ M GV N + LC + KA + + + FIPD+ TYS +L + A +F EM G D+ TY IMVD CKAG +++A M + C P Y+ L+H Y ++ A + F M G ++ Y+ALI CKA + Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603 HSP 4 Score: 72.7886 bits (177), Expect = 1.124e-12 Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 1 Query: 34 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMN-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEM----------------EKNGIQADVAMYNALIGAFCKANK 513 G + + ++ +L+ LC + + A +F+ M + D TY+I+++ + K + +AR+ F EM + GC P++VTY ++ KA +V A + ++M S C P YS L+ + ++E A F M + N + +V Y AL+ FCK+++ Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654 HSP 5 Score: 71.633 bits (174), Expect = 2.505e-12 Identity = 44/159 (27.67%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 46 NLAAFNGLLSALCKSKNVRKAQEIFDCMN-DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 N+ + LL CKS V +A+++ D M+ + P+ Y L++G K L A+E+ EM + G + TY ++D K R D A ++ M C P IY+ ++ + ++A ME+ G Q +V Y A+I F K + Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 47/167 (28.14%), Postives = 85/167 (50.90%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 N + +G+T N+ N L+ ALCK ++ A ++ D + +P+ TY+ +L G+ ++ A+ + EM+D G PD TY +++D CK GR EA ++ M+ +P Y V++ E + +A + F EM + D ++ +I A C+ +K Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346 HSP 2 Score: 73.9442 bits (180), Expect = 5.046e-13 Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 1 Query: 67 LLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 L+ CK +A + D M I P+ TY +++ K+ AR +F EM++ PD ++D LC+ +VDEA G+ + M C P + + S L+H E R+ +A F E EK I + + YN LI C+ Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPS-LLTYNTLIAGMCE 412
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKA 507 N M + G ++ +N +L LCK K + +A ++F+ M +R + PDS T +IL++G K NL A E+F++M + D+VTY ++D K G +D A I M S PT YS+LV+ + + +A + EM I+ V + N++I +C++ Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598 HSP 2 Score: 84.3445 bits (207), Expect = 3.734e-16 Identity = 47/165 (28.48%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 F+ M+ V +L F+ ++S +S N+ KA F+ + + IPD+ Y+IL++G+ + + A + EM+ GC D+VTY ++ LCK + EA + M P S+ ++L+ + +++A++ F +M++ I+ DV YN L+ F K Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527 HSP 3 Score: 78.5666 bits (192), Expect = 2.049e-14 Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 N M G + + +N +++ LCK +A+E+F + + PDS TY LL K ++ ++F +M PD+V + M+ + ++G +D+AL S+ P + IY++L+ Y + I A++ EM + G DV YN ++ CK Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457 HSP 4 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 FN M + + + L+ CK N++ A E+F M ++ I D TY+ LL+G+GK ++ A+EI+ +MV P ++Y I+V+ LC G + EA + M S +PT I + ++ Y D +M G D YN LI F + Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632 HSP 5 Score: 68.9366 bits (167), Expect = 1.623e-11 Identity = 42/176 (23.86%), Postives = 83/176 (47.16%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTF--LEMEKNGIQADVAMYNALIGAFCKANKFK 519 A+ F M++ + ++ +N LL K ++ A+EI+ D ++ +P +YSIL+ +L A ++ EM+ P ++ M+ C++G + ++ M S P Y+ L++ + E + A +E E+ G+ DV YN+++ FC+ N+ K Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.210e-18 Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMN---DRFIPDSKTYSILLEGWGK-----------DPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 453 A+ TF M++Y ++ A+N +++ALC+ N +KA+ + D M R+ PD+ TY+IL+ + + + A +FREM+ G PD+VTY ++D CK R+ AL + + M + C P Y+ + Y V N IE A++ M+K G Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18 Identity = 53/170 (31.18%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKA 507 A+ FN MQ+ G + + L+ K+ + A +++ M + PD+ TYS+++ GK +LP A ++F EMVD GC P++VTY IM+D+ KA AL + + M + +P YS+++ G +E+A F EM++ D +Y L+ + KA Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587 HSP 2 Score: 80.8777 bits (198), Expect = 4.128e-15 Identity = 44/156 (28.21%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 58 FNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 + ++ L ++K ++ D M D P++ TY+ L+ +G+ L A +F +M + GC PD VTY ++D+ KAG +D A+ + + M + P +F YSV+++ G + A F EM G ++ YN ++ KA ++N Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522 HSP 3 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 47/172 (27.33%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 A+ + MQ G++ + ++ +++ L K+ ++ A ++F M D+ P+ TY+I+++ K N A +++R+M + G PD VTY I+++VL G ++EA + M P +Y +LV +G +E A + M G++ +V N+L+ F + NK Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624 HSP 4 Score: 71.2478 bits (173), Expect = 3.271e-12 Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALI 489 F M G T NL +N ++ K++N + A +++ D N F PD TYSI++E G L A +F EM PD YG++VD+ KAG V++A ++M +P + L+ T+ N+I +A + M G++ + Y L+ Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP339_ARATH (Pentatricopeptide repeat-containing protein At4g26800 OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.805e-18 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 AVY M+K G+ +++ L+ LCK++ V A E+ M DR I P+ TYS L+ G K L A EM NP+++T+ ++D K G++ + + K M M P F YS L++ + NR+++A+ M G +V Y+ L F K+++ Sbjct: 177 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348 HSP 2 Score: 87.8113 bits (216), Expect = 3.377e-17 Identity = 45/165 (27.27%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 M+ G++ N+ ++ L++ LCKS + A+ M+ + I P+ T+S L++ + K L + +++ M+ +P++ TY ++ LC RVDEA+ ++ M S C P YS L + + +R++D + +M + G+ A+ N LI + +A K Sbjct: 219 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383 HSP 3 Score: 72.4034 bits (176), Expect = 1.468e-12 Identity = 43/165 (26.06%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 M K G+ ++ + L++ C S +++ A + M I D +IL++ K+ + A E+ + M D G +P++VTY ++ LCK+GR+ +A + MDS P +S L+ Y ++ + M + I +V Y++LI C N+ Sbjct: 149 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 313
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18 Identity = 42/163 (25.77%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 34 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 G+ ++ ++N ++ LCK++ + A M DR I P+ T++ L G+ ++ + + +++ G PD++T+ ++++ LC+A + +A K M +P Y++L+ + + +V F +M++NG+ D+ YNA I +FCK K K Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVK 582 HSP 2 Score: 70.4774 bits (171), Expect = 5.579e-12 Identity = 38/149 (25.50%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 31 YGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI----PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQAD 465 +G ++ F+ +++ LC++K ++ A FDC + P+ TY+IL+ + R+ ++F +M + G +PD+ Y + CK +V +A ++K+M + +P +F YS L+ R +A + F +E++G D Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDA---FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634 HSP 3 Score: 69.707 bits (169), Expect = 9.517e-12 Identity = 39/165 (23.64%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFD-CMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 MQ G++ NL FN LS +V+K + + + F PD T+S+++ + + A + F+EM++ G P+ +TY I++ C G D ++ + M P + Y+ + ++ +++ A + M + G++ D Y+ LI A ++ + Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18 Identity = 51/168 (30.36%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIF-REMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 M K G ++ +++ +++ L K+ + A E+FD M++R + PD Y+IL++G+ K+ + A E++ R + D+ P++ T+ IM+ L K GRVD+ L I + M + + YS L+H ++ A F E+++ DV YN ++G FC+ K K Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342 HSP 2 Score: 81.2629 bits (199), Expect = 3.161e-15 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 55 AFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 A+ ++ LCK K + +A + M+ + +S + L+ G +D L A REM GC P +V+Y I++ LCKAG+ EA VK M +P YS+L+ + +I+ A++ + + ++G++ DV M+N LI C K Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584 HSP 3 Score: 79.7221 bits (195), Expect = 9.197e-15 Identity = 44/168 (26.19%), Postives = 84/168 (50.00%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQE-IFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFC 501 A + M K G + ++N L+ LCK+ +A + + + + + PD KTYSILL G +D + A E++ + + +G D++ + I++ LC G++D+A+ ++ +M+ C Y+ L+ + A + M K G+Q D+ YN ++ C Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650 HSP 4 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 42/167 (25.15%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 FN + + + ++ +N +L C+ ++++ E++ M + + +Y+IL++G ++ + A I+R M G D TYGI + LC G V++ALG+++ ++S + Y+ ++ + R+E+A + EM K+G++ + + NALIG + ++ Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479 HSP 5 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 46/158 (29.11%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 46 NLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516 N+ ++N L+ L ++ + +A I+ M + + D TY I + G + + +A + +E+ +G + D+ Y ++D LCK R++EA +VK M + S + + L+ ++R+ +A EM KNG + V YN LI CKA KF Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515 HSP 6 Score: 68.9366 bits (167), Expect = 1.623e-11 Identity = 42/160 (26.25%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 43 QNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 ++L ++ L+ LC + NV KA+ +F+ +++R D TY+ +L G+ + + + E++R M + +IV+Y I++ L + G++DEA I + M + Y + +H V + A+ E+E +G DV Y ++I CK + + Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446 HSP 7 Score: 68.1662 bits (165), Expect = 2.769e-11 Identity = 37/140 (26.43%), Postives = 67/140 (47.86%), Query Frame = 1 Query: 100 RKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 ++ +EIF C P ++Y+ LL + + + +F G P++ TY +++ + CK ++A G + M +P F YS +++ +++DA++ F EM + G+ DV YN LI F K K Sbjct: 102 KRMREIFGCE-----PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236 The following BLAST results are available for this feature:
BLAST of CB250282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250282 ID=CB250282; Name=CB250282; organism=Citrus sinensis; type=EST; length=525bpback to top |