CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_ANADF (Methylthioribose-1-phosphate isomerase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.012e-27 Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 D IP LM G ++ V+VGADR+AANGD ANKIGTY+LA+ A +H++ FYVAAP +++DL G I IEER +E++ G+++A +G+ PAFDVTP L+T IITE+GVV + Sbjct: 199 DGIPVTLLTDNMAGWLMAQGEIACVVVGADRIAANGDVANKIGTYALAVLAAYHHLPFYVAAPWSTVDLATPDGSAIPIEERGDEEVVTL---AGQRIAPAGVPARYPAFDVTPEPLVTAIITERGVVRR 325
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_ANADE (Methylthioribose-1-phosphate isomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.012e-27 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP LM G + V+VGADR+AANGD ANKIGTY+LA+ A H + FYVAAP +++DL +G +I IEER++ E++ G+++A +G+ PAFDVTPA L+T I+TE+GVV Sbjct: 200 DGIPVTVLTDGMAGWLMARGEIGCVVVGADRIAANGDVANKIGTYALAVLAAHHRLPFYVAAPWSTVDLATPTGADIPIEERASDEVVVL---AGQRIAPAGVPARYPAFDVTPAALVTAIVTERGVV 324
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_YERE8 (Methylthioribose-1-phosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.934e-27 Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 LM GRV AV VGADR+AANGD ANKIGTYSLA+ A +H I FYVAAP T+ D +G I IE+R A E+ GG G Q A + V+NPAFDVTPA LI+G + + GV+T Sbjct: 219 LMAQGRVDAVWVGADRIAANGDVANKIGTYSLAVLANYHRIPFYVAAPHTTHDPDCPNGAAIPIEQRDASEVKGVSGGFGHCQWAPANAPVYNPAFDVTPAALISGWVLDSGVIT 333
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_GEOLS (Methylthioribose-1-phosphate isomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.934e-27 Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 D IP M G ++ +VGADR+AANGDTANKIGT+S+A+ A+ H I FYVAAP++++DL+L+ G I IEER + E+ R G +A G+ V NP+FDVTPA IT IITE GV Sbjct: 208 DSIPVTLISDNMAGFFMSRGEITCCVVGADRIAANGDTANKIGTFSVAVLAREHGIPFYVAAPVSTLDLSLADGSRIPIEERPSTEVTHIR---GLPIAPEGVKVRNPSFDVTPAKYITAIITEYGV 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_EXIS2 (Methylthioribose-1-phosphate isomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.934e-27 Identity = 63/112 (56.25%), Postives = 82/112 (73.21%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +K+ +++A+IVGADR+ NGDTANKIGT+ LAL A+ I FYVAAPL++ D T SG EI IEER A+E+ G+ A +G+ V+NPAFDVTP +LIT IITE GV+ Sbjct: 223 IKEKQITAIIVGADRITRNGDTANKIGTFQLALLARAFGIPFYVAAPLSTFDFTSLSGDEIEIEERDAREVTQL---AGKATAPAGVPVFNPAFDVTPHDLITAIITELGVI 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_CITK8 (Methylthioribose-1-phosphate isomerase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.934e-27 Identity = 67/115 (58.26%), Postives = 79/115 (68.70%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 LM G V AV VGADR+AANGD ANKIGTYSLA+ AKFH I FYVAAP T++D +G I IE+R+A E+ G G Q A V+NPAFDVTPA LI+G + + GVVT Sbjct: 214 LMAKGLVDAVWVGADRIAANGDVANKIGTYSLAVLAKFHGIPFYVAAPQTTLDPHCPNGDAIPIEQRAAGEVTGVAGSFGAVQWAPENAQVYNPAFDVTPAALISGWVLDSGVVT 328
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_BACP2 (Methylthioribose-1-phosphate isomerase OS=Bacillus pumilus (strain SAFR-032) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.934e-27 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 MK+ ++SAVIVGADR+A NGD ANKIGT SLA+ AK I F++AAPL++ D++ G +I IEER E+ + G Q+A + V+NPAFDVTP +LI+GIITEKG++T Sbjct: 227 MKEKQISAVIVGADRIARNGDAANKIGTLSLAILAKHFQIPFFIAAPLSTFDVSTKDGSDIPIEERDPLEV---KEFNGVQIAPPDVQVFNPAFDVTPHHLISGIITEKGIIT 336
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFT (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 403 LMK G+V VIVGADR+ ANGDTANKIGTY LA+ A+ H + F V A ++D+ +G+ I IE+R +ELL G G + A GI+ WNP FDVTP LI I+TE+GV+ A Sbjct: 231 LMKSGQVQWVIVGADRICANGDTANKIGTYQLAITARHHGVKFMVVASAATVDMDTVAGEAIEIEQRDPEELL---GVSGVRTVAEGIAAWNPVFDVTPGALIDAIVTERGVIQSPDA 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_XYLF2 (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa (strain M23) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 403 LMK G+V VIVGADR+ ANGDTANKIGTY LA+ A+ H + F V A ++D+ +G+ I IE+R +ELL G G + A GI+ WNP FDVTP LI I+TE+GV+ A Sbjct: 231 LMKSGQVQWVIVGADRICANGDTANKIGTYQLAITARHHGVKFMVVASAATVDMDTVAGEAIEIEQRDPEELL---GVSGVRTVAEGIAAWNPVFDVTPGALIDAIVTERGVIQSPDA 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SORC5 (Methylthioribose-1-phosphate isomerase OS=Sorangium cellulosum (strain So ce56) GN=mtnA PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 65/129 (50.39%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 D IP M+ G + AV+VGADR+A NGD ANKIGTY LA A+ H I FYVAAP ++IDL SG I IEERS EL G +V G+ V +PAFDVTPA L+T + TE+G +T Sbjct: 196 DGIPVEVISDSMAAWFMQKGEIGAVVVGADRIARNGDVANKIGTYGLACLARHHGIPFYVAAPWSTIDLATDSGASIPIEERSRDELAVVG---GRRVVPPGVPVRHPAFDVTPAELVTAVFTERGKLT 321 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |