CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SERP5 (Methylthioribose-1-phosphate isomerase OS=Serratia proteamaculans (strain 568) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.159e-25 Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 LM G+V AV VGADR+AANGD ANKIGTYSLA+ A +H I FYVAAP T+ D +G I IE+R+A E+ G G Q A V+NPAFDVTPA LI+G + + GV+T Sbjct: 214 LMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPHCPNGAAIAIEQRAAVEVTGVTGSFGSCQWAPVDAPVYNPAFDVTPAALISGWVFDSGVIT 328
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PSEMY (Methylthioribose-1-phosphate isomerase OS=Pseudomonas mendocina (strain ymp) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.159e-25 Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 D +P LMK ++ VIVGADR+ ANGD ANKIGTY LA+ A H + F V AP ++ID++L SG +I++EERS ELL G Q A+ + NP FDVTPA+L+ I+TEKGV+ + Sbjct: 217 DGVPVSLNVDAAAAHLMKTKGITWVIVGADRITANGDVANKIGTYQLAVNAMHHGMRFMVVAPSSTIDMSLESGDDILLEERSGSELLEVAG----QPVAADVPAVNPVFDVTPADLVDYIVTEKGVIER 342
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_AZOVD (Methylthioribose-1-phosphate isomerase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.159e-25 Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 403 LMK ++ VIVGADR+ A GD ANKIGTY LA+ A H + F V AP ++ID++L SG++I IEER +ELL +G + A+ + NP FDVTPA+LI I+TE+GVV + A Sbjct: 232 LMKTKGITWVIVGADRITAEGDVANKIGTYQLAVVAMHHGVRFMVVAPSSTIDMSLHSGEDIPIEERDGRELL----EIGGKRVAASVEAVNPVFDVTPADLIDAIVTERGVVERPNA 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNFM (Methylthioribose-1-phosphate isomerase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.819e-25 Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 LM G + V+VGADR+AANGDTANKIGTY A+ A H I FYVAAP ++ID +L G I IE+R+ KE+ G +VA G + N AFDVTP ITGIITE G+++K Sbjct: 226 LMSRGMIDVVVVGADRIAANGDTANKIGTYMAAVLACTHGIPFYVAAPRSTIDASLPDGDGIPIEQRAPKEVTHFN---GRRVAPQGAAALNAAFDVTPNKYITGIITEVGILSK 337
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_LEPIN (Methylthioribose-1-phosphate isomerase OS=Leptospira interrogans GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.819e-25 Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQ----------VAASGISVWNPAFDVTPANLITGIITEKGVVT 391 +M ++ AVIVGADR+A+NGDTANKIGTY LA+ AK H + FYVAA S+D + +G I IE R +E + S G L + +A G+ NP+FDVTPA+LITGIITEKG+V+ Sbjct: 228 VMSSRKIDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAATAKSMDFRIPNGSYIPIEMRKEEE-ITSFGFLKDSDGKPLLKEGVIAPKGMKALNPSFDVTPASLITGIITEKGIVS 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_LEPIC (Methylthioribose-1-phosphate isomerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.819e-25 Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQ----------VAASGISVWNPAFDVTPANLITGIITEKGVVT 391 +M ++ AVIVGADR+A+NGDTANKIGTY LA+ AK H + FYVAA S+D + +G I IE R +E + S G L + +A G+ NP+FDVTPA+LITGIITEKG+V+ Sbjct: 228 VMSSRKIDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAATAKSMDFRIPNGSYIPIEMRKEEE-ITSFGFLKDSDGKPLLKEGVIAPKGMKALNPSFDVTPASLITGIITEKGIVS 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_CLOBM (Methylthioribose-1-phosphate isomerase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=mtnA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.819e-25 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +M G++ AVIVG DR+AANGDTANKIGT +++ AK+ I Y+AAP SID+ +G++I IEER+ +E+ G A G+ V+NP FDVTP IT I+TEKG+V Sbjct: 226 VMSQGKIDAVIVGCDRIAANGDTANKIGTMGVSILAKYFGIPMYIAAPTPSIDIDTKTGKDIPIEERNPEEV---TSRFGVWTAPRGVKVYNPGFDVTPHENITAIVTEKGIV 335
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEYD (Methylthioribose-1-phosphate isomerase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.809e-25 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 L++ G + IVG DR NGD ANKIGTYSL++ K +N+ FYVAAP +SIDL++ SG I IEERS +E+ + G ++A GI V N AFDVTPA +T IITEKG+ Sbjct: 224 LLRKGMIDFAIVGTDRTVRNGDVANKIGTYSLSVLCKENNVPFYVAAPTSSIDLSIPSGDMIPIEERSFEEVTTIK---GVKIAPEGIKVINFAFDVTPAKYVTAIITEKGI 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PSEPK (Methylthioribose-1-phosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.809e-25 Identity = 62/134 (46.27%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 403 ++ IP LMK ++ V+VGAD +AANGD A KIGTY LA+ A H + F V AP TSIDL L++G++I +EER A E L G + G+ V+NP FDVTPA+LI I+TE+G+V + A Sbjct: 216 NEGIPVTLCADSALAHLMKTKGITWVVVGADCIAANGDMAGKIGTYQLAVSAMHHGVRFMVVAPSTSIDLNLATGEDIPLEERDADEWL----DFGGTPVSPGVEVFNPVFDVTPADLIDVIVTERGIVERPDA 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PSEPF (Methylthioribose-1-phosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.809e-25 Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 ++ IP +MK V+ VIVGADR+ ANGD ANKIGTY LA+ A H + F V AP ++ID+ L+SG +I IEER ELL +G + + + +NP FDVTPA+LI I+TEKG+V + Sbjct: 216 NEGIPVTLNADSAAAHIMKTKGVTWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMNLASGDDIPIEERDGAELL----EVGGKRVGADVEAFNPVFDVTPADLIDAIVTEKGIVER 342 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |