CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBJ (Methylthioribose-1-phosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.071e-24 Identity = 61/124 (49.19%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQ----------VAASGISVWNPAFDVTPANLITGIITEKGVVT 391 +M ++ AVIVGADR+A+NGDTANKIGTY LA+ AK H + FYVAA S+D + G I IE R E + S G L + +A +GI NP+FDVTPA+LI+GIITE+G+++ Sbjct: 228 VMSSRKIHAVIVGADRIASNGDTANKIGTYPLAIIAKHHGVPFYVAATSKSMDFRIPDGSHIPIEMRKENE-VTSFGFLKDATGKPLLNEGVLAPNGIKALNPSFDVTPASLISGIITERGIIS 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_DESDA (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.317e-24 Identity = 66/129 (51.16%), Postives = 80/129 (62.02%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP LM G V V+VGADR+AANGDTANKIGTY +AL A+ +I FYVAAPL++ID G I IEER E+ +GE ++ + V N AFDVTPA I+GIITEKGV+ Sbjct: 208 DGIPVTVACDNACALLMSRGLVQRVVVGADRIAANGDTANKIGTYGVALLARHFHIPFYVAAPLSTIDPATPDGAGIPIEERPELEVT----HMGETRLCPENVPVLNFAFDVTPAEYISGIITEKGVL 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PSEE4 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=mtnA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23 Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 403 D +P LMK +S V+VGAD +AANGD A KIGTY +A+ A H + F V AP +SIDL L++G++I +E R +ELL G QV A + V+NP DVTPA+LI I+TEKGVV + A Sbjct: 217 DGVPVTVVADAAAGHLMKTKGISWVVVGADCIAANGDVAAKIGTYQIAVAAMHHGLRFMVVAPSSSIDLNLATGEDIPLETRGVEELL---EVAGIQVTAD-VEVYNPVVDVTPADLIDVIVTEKGVVERPDA 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_RHOSK (Methylthioribose-1-phosphate isomerase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=mtnA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSG-QEIVIEERSAKELLCSRGG------LGEQVAASGISVWNPAFDVTPANLITGIITEKGV-VTKAGADDA 412 LM+ G V VIVG DR A GD NKIGTY AL AK + + FYVA P +ID T+ G EI IEERS+ E+ +G + Q++ G NPAFDVTPA+L+TG+ITE+G+ +AGA +A Sbjct: 226 LMQHGEVDLVIVGTDRTTAQGDVCNKIGTYLKALAAKANGVPFYVALPSPTIDWTVRDGVAEIPIEERSSAEVTHVQGKAPDGSVISVQISPDGTGARNPAFDVTPASLVTGLITERGICAAEAGAMEA 354
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PARD8 (Methylthioribose-1-phosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=mtnA PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 +M+ G V AV+VG DRVAANGD ANKIGT +A+ A+ + I FYV P ++ID + G IVIEER+ E+ + ++A + V+NPAFD+TP LIT IITEKG+ K Sbjct: 220 VMRKGWVHAVVVGCDRVAANGDVANKIGTSGVAILARHYKIPFYVLGPTSTIDGSCPDGDSIVIEERNPDEV--TEMWYSRRMAPKDVKVYNPAFDITPHELITAIITEKGIFYK 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_NOCFA (Methylthioribose-1-phosphate isomerase OS=Nocardia farcinica GN=mtnA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.501e-23 Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 M G V V+VGADRV A GD ANKIGTY++AL A H I F V AP ++ D +S ++IV+EER+A+E+ G A G + +NPAFDVTPA+L+T ++TE GVV Sbjct: 223 MATGLVDCVLVGADRVTARGDVANKIGTYAVALAAHRHGIPFVVVAPESTRDPATASWRDIVVEERAAEEVTAF---AGSATAPVGTAAFNPAFDVTPADLVTAVVTEHGVV 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_OCHA4 (Methylthioribose-1-phosphate isomerase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=mtnA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.879e-23 Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSG-QEIVIEERSAKELLCSRGGLGE------QVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 LM+ G + VIVG DR ANGD NKIGTY AL A+ +++ FYVA P +ID T+ G +EI IEER+A E+ +G + +++ G NPAFDVTPA LITG+ITE+G+ T Sbjct: 230 LMQHGDIDMVIVGTDRTTANGDVCNKIGTYLKALAARDNDVPFYVALPSPTIDWTVQDGVKEIPIEERTADEVSFVQGRAADGSIASVRISPEGSPAANPAFDVTPARLITGLITERGIAT 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_DESAD (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=mtnA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.003e-22 Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP LMK G V V+VGADRV ANGD NKIGTY +AL A+ I FYVAAP+ +ID +G ++ IE+R+ E+ +G+ ++ G+ V+N AFD TP LI GIITEKGV+ Sbjct: 207 DGIPVKVACDNACALLMKKGLVQKVVVGADRVTANGDAVNKIGTYGVALLAREFGIPFYVAAPVYTIDPETPTGDDVPIEDRTPTEVT----HVGDHRITPEGVEVFNFAFDPTPNELIAGIITEKGVL 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_METC4 (Methylthioribose-1-phosphate isomerase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=mtnA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.710e-22 Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSG-QEIVIEERSAKELLCSRGGLGE------QVAASGISVWNPAFDVTPANLITGIITEKGV 385 LM+ G+V IVG+DR A+GD NKIGTY AL A + I FY A P ++ID TLS G ++I IEER A+E+ G + V + G V NPAFDVTPA L+TGIITE+GV Sbjct: 228 LMQHGQVDVCIVGSDRTTASGDVCNKIGTYLKALAATDNRIPFYAALPFSTIDWTLSDGVRDIPIEERDAREVTHLTGRTDDGAFATVAVVSPGSPVANPAFDVTPARLVTGIITERGV 346
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_RHIME (Methylthioribose-1-phosphate isomerase OS=Rhizobium meliloti GN=mtnA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.810e-22 Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSG-QEIVIEERSAKELLCSRGGLGE------QVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 LM+ G V VIVG DR ANGD NKIGTY AL A+ + + FYVA P +ID T+ G +EI IEER E+ +G + +++ G NPAFDVTPA LITG+ITE+G+ T Sbjct: 230 LMQHGDVDLVIVGTDRTTANGDVCNKIGTYLKALAARDNGVPFYVALPSPTIDWTVHDGVKEIPIEERPGDEVSFVQGRASDGSIASVRISPEGSPAANPAFDVTPARLITGLITERGIAT 350 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |