CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSF (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain FRC-32) GN=mtnA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP MK G ++A +VGADR+AANGDTANKIGTYS+A+ AK + I FYVAAP++++DL+L SG EI IEER A E+ + G VA G+ V NPAFDVTPA I GIITEKGVV Sbjct: 208 DGIPVTLIADNMAGYFMKKGAITACVVGADRIAANGDTANKIGTYSVAVLAKENKIPFYVAAPVSTLDLSLKSGDEIPIEERHACEVTHLQ---GLPVAPEGVKVRNPAFDVTPAKYIAGIITEKGVV 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_ALCBS (Methylthioribose-1-phosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mtnA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +D IP LM+ G++ AVIVGADR+ ANGDTANKIGTY+LA+ A+ HNI F VAAP++++D L +G IVIEER A E+ R G+ +A V+NPAFD+TPA LIT I+TE+GVV Sbjct: 203 NDGIPVTLVADSCAGQLMQQGKIQAVIVGADRITANGDTANKIGTYNLAVLAQHHNIPFIVAAPVSTLDPALPNGSHIVIEERDANEV---RNVQGKSLAPEHCPVYNPAFDITPAQLITAIVTERGVV 328
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THESQ (Methylthioribose-1-phosphate isomerase OS=Thermotoga sp. (strain RQ2) GN=mtnA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.229e-30 Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LMK G + AV+VGADR+A NGDTANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER +E+ C G ++A G+ V NPAFDVT LIT IITEKGV+ Sbjct: 220 LMKKGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIKSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEP1 (Methylthioribose-1-phosphate isomerase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=mtnA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.229e-30 Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LMK G + AV+VGADR+A NGDTANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER +E+ C G ++A G+ V NPAFDVT LIT IITEKGV+ Sbjct: 220 LMKKGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIKSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA2_THELT (Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.229e-30 Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +MK ++ +VGADR+AANGDTANKIGTY+LA+ AK+HN+ YV AP ++IDL +GQ+I IEERSA E+ C QVA V+NPAFDVTPA LI+GIITEKG+V Sbjct: 221 VMKKFKIDLALVGADRIAANGDTANKIGTYNLAIVAKYHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRCVG---NSQVAPQESPVFNPAFDVTPAELISGIITEKGIV 330
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_DESRM (Methylthioribose-1-phosphate isomerase OS=Desulfotomaculum reducens (strain MI-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.911e-30 Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADD 409 LM V ++VGADR+ ANGD ANKIGTY +A+ A HNI FYVAAPL++ID++LSSG+EI IEER +E+ + G G+ +A G+ VWNPAFDVTP +L+ IITE+GVV A++ Sbjct: 221 LMSKKMVDCIVVGADRITANGDVANKIGTYGVAVLANHHNIPFYVAAPLSTIDMSLSSGEEIPIEERDPQEV--THHG-GQPMAPEGVQVWNPAFDVTPNSLVKAIITERGVVLPPFAEN 337
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEMA (Methylthioribose-1-phosphate isomerase OS=Thermotoga maritima GN=mtnA PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.802e-30 Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LMK G + AV+VGADR+A NGDTANKIGTYSLA+ AK +NI FYVAAP+++ID T+ SG+EI IEER +E+ C G ++A G+ V NPAFDVT LIT IITEKGV+ Sbjct: 220 LMKRGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCG----GNRIAPEGVKVLNPAFDVTENTLITAIITEKGVI 329
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEPX (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.965e-30 Identity = 63/125 (50.40%), Postives = 90/125 (72.00%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIK 424 L++DG++ ++VGADR+A NGDTANKIGT+ L++ AK +N+ FYV AP ++ID + SG+EI+IEERS +E+ G ++A GI V+NPAFDVTP ITGIITEKG++ ++ +K Sbjct: 224 LIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHIN---GVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKPPYKENILKLK 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEP3 (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtnA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.965e-30 Identity = 63/125 (50.40%), Postives = 90/125 (72.00%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIK 424 L++DG++ ++VGADR+A NGDTANKIGT+ L++ AK +N+ FYV AP ++ID + SG+EI+IEERS +E+ G ++A GI V+NPAFDVTP ITGIITEKG++ ++ +K Sbjct: 224 LIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHIN---GVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKPPYKENILKLK 345
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_TRIEI (Methylthioribose-1-phosphate isomerase OS=Trichodesmium erythraeum (strain IMS101) GN=mtnA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 6.484e-30 Identity = 72/144 (50.00%), Postives = 92/144 (63.89%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIKDFI 433 + IP MK G + AV+VGADR+AANGDTANKIGTYSLA+ ++ HNI YVAAPL++ID +S G EI IEER KE+ +GE ++ + +NPAFDVTPA LITGI+TE G V G + F +K + Sbjct: 215 ENIPVTLISDNMAAHCMKQGLIHAVVVGADRIAANGDTANKIGTYSLAIVSQAHNIPLYVAAPLSTIDFKISDGSEIPIEERDTKEIY----QVGETRICPKQVEFYNPAFDVTPAELITGIMTEHGTVL-PGELEQFRVKQLV 353 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |