CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEEB (Methylthioribose-1-phosphate isomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.489e-29 Identity = 65/111 (58.56%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 M+ G + AV+VGADR+A NGDTANKIGTYS+AL AK HNI F+VAAPL++ID ++++G EI IEER +E+ + G ++ +G+ +NPAFDVTPA+LI+GIITE GV Sbjct: 233 MQRGMIDAVVVGADRIALNGDTANKIGTYSVALAAKAHNIPFFVAAPLSTIDTSIATGAEIPIEERHPQEIY--QVGF-SRITPAGVDFYNPAFDVTPAHLISGIITELGV 340
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNP6 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=mtnA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.489e-29 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LM+ ++ +VG DRV ANGD ANKIGTY+LAL AK H + FYVA P+++ID +L++G EI IEER +E+ R G+ +A +G WNPAFD+TPA L+T IITE+G++ Sbjct: 223 LMRQQQIDCCLVGCDRVTANGDVANKIGTYNLALAAKAHGVPFYVACPISTIDRSLATGAEIEIEERDGREITEIR---GQAIAPAGTKTWNPAFDITPAELVTAIITERGIL 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNE7 (Methylthioribose-1-phosphate isomerase OS=Synechococcus elongatus (strain PCC 7942) GN=mtnA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.489e-29 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LM+ ++ +VG DRV ANGD ANKIGTY+LAL AK H + FYVA P+++ID +L++G EI IEER +E+ R G+ +A +G WNPAFD+TPA L+T IITE+G++ Sbjct: 223 LMRQQQIDCCLVGCDRVTANGDVANKIGTYNLALAAKAHGVPFYVACPISTIDRSLATGAEIEIEERDGREITEIR---GQAIAPAGTKTWNPAFDITPAELVTAIITERGIL 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA2_BACCZ (Methylthioribose-1-phosphate isomerase 2 OS=Bacillus cereus (strain ZK / E33L) GN=mtnA2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.169e-29 Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 68 VSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADDAFDIKDFIQKT 442 ++A+IVGADR+ ANGDTANKIGT +LA+ AK+ +I FYVAAPL++ D+T +G EIVIEER E+ G+QVA G +V+NPAFDVTP LITGIITE+G++ D +I +KT Sbjct: 232 INAIIVGADRIVANGDTANKIGTMNLAILAKYFDIPFYVAAPLSTFDITKQTGAEIVIEERDETEVTKI---FGKQVAPVGTTVYNPAFDVTPNELITGIITEQGIIR---GDYKREIASLFEKT 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA1_THELT (Methylthioribose-1-phosphate isomerase 1 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.169e-29 Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +MK G++ AVIVGADR+AANGD ANKIGTYS+A+ + H I FYVAAP ++ID+ + +G EI IEERS E+ G +VA G++V+NPAFDVT LIT IITEKG++ Sbjct: 223 VMKQGKIDAVIVGADRIAANGDVANKIGTYSVAVLSNQHGIPFYVAAPTSTIDIKIKNGSEIPIEERSHDEVTHVH---GVKVAPDGVAVYNPAFDVTEHQLITAIITEKGIL 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_RHOFD (Methylthioribose-1-phosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mtnA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.364e-29 Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 + IP LM G V A++VG DRVAANGD ANKIGTY +A+ A+ HNI FYVA PL++IDL + G I IEER+A+E+ G Q AA G+ V NPAFDVTPA L+T +ITE+GV+ Sbjct: 216 ENIPVTLITDNMAGHLMSRGEVDAIVVGTDRVAANGDVANKIGTYMVAVLAQRHNIPFYVACPLSTIDLAIPDGAAIPIEERAAEEV---TGFRDCQWAAKGVQVRNPAFDVTPAELVTALITERGVL 340
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_NOSP7 (Methylthioribose-1-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=mtnA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.364e-29 Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQV-AASGISVWNPAFDVTPANLITGIITEKGVV 388 MK G + AV+VGADR+AANGDTANKIGTYS+A+ AK HNI F+VAAPL+++D L+ G +I IEER E+ +G+ + G+ +NPAFDVTPA LIT IITE G + Sbjct: 231 MKQGLIHAVVVGADRIAANGDTANKIGTYSVAIAAKAHNIPFFVAAPLSTVDFELADGSKIPIEERDPTEIY----QVGDTILTPEGVDFYNPAFDVTPAELITAIITENGAI 339
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: EI2B1_PYRFU (Putative translation initiation factor eIF-2B subunit 1 OS=Pyrococcus furiosus GN=PF1349 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.364e-29 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +M+ G+V A+IVGADR+ ANGD ANKIGTY LA+ AK H I F+ APL+SID++LSSG+EI IEERS +E+L G A + V+NPAFDVTP +TGIIT++GVV Sbjct: 233 VMQQGKVDAIIVGADRIVANGDFANKIGTYMLAVLAKEHGIPFFTVAPLSSIDMSLSSGKEIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYLTGIITDRGVV 341
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THEM4 (Methylthioribose-1-phosphate isomerase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=mtnA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.086e-28 Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 MK G+++AVIVGADRVA+NGD ANKIGTY +A+ AK H I FYVAAP ++IDL +G++I IEER E+ C G Q+A + V+NPAFDVT A LIT IITEKG+V Sbjct: 224 MKLGKINAVIVGADRVASNGDVANKIGTYMVAVLAKRHGIPFYVAAPTSTIDLNTQTGKDIPIEERKHTEVTHCG----GTQIAPDNVKVFNPAFDVTNAELITAIITEKGIV 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNPX (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain WH8102) GN=mtnA PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.086e-28 Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LM+ V AV+VG DRVAANGD ANK+GTY+LAL A+ H I FYV AP +S+D + S G I IEER +E+ R G+++AA G + WNPAFD+TPA+L+T +ITE GV+ Sbjct: 211 LMRRQEVDAVLVGCDRVAANGDVANKVGTYNLALVARAHGIPFYVCAPGSSMDRSTSDGDAITIEERPQEEITQHR---GQRLAAPGAAAWNPAFDITPAHLVTALITEFGVI 320 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |