CB250306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250306 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.287e-12 Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 3 Query: 3 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFE 305 LNE + ++ G A + G LA+E ++ + + DV LH DAIHRG QVIP R + A L A LLEP+ + I P +G S + +RG V + Sbjct: 554 LNETMELILEGLHEALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLD 654
BLAST of CB250306 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.987e-12 Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 3 Query: 3 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 314 LNE+ D ++ GF A EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + + Q Sbjct: 554 LNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLVDMKQ 657
BLAST of CB250306 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.902e-12 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 3 Query: 3 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 314 LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V + Q Sbjct: 553 LNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRVDDMYQ 656
BLAST of CB250306 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.902e-12 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 3 Query: 3 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 314 LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V + Q Sbjct: 553 LNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRVDDMYQ 656
BLAST of CB250306 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.529e-11 Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 3 Query: 3 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFE 305 + E+ D V+ F G +A E G+ ++ D LH DAIHRG GQVIP R I + A L EPV ++ + P +G + +++N +RG + + Sbjct: 572 IGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVKLTDAQLHEDAIHRGPGQVIPAVREAIKLAMKDAGLVLYEPVQVILVDVPPDYIGDVTALINSRRGAILD 672 The following BLAST results are available for this feature:
BLAST of CB250306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250306 ID=CB250306; Name=CB250306; organism=Citrus sinensis; type=EST; length=322bpback to top |