CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 3.931e-37 Identity = 71/139 (51.08%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH P KRF DF+ +R+EI+ +TD+ G +K +S+ I+L I+SP+V+++TL+DLPG+TKV V QP I I M+ SY+++P+C+ILA++PAN D+A SDA+++A DP G RT G+ TKLDIMD+GT L Sbjct: 89 EFLHAPKKRFADFAAVRKEIEDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVATKLDIMDKGTDCLDVL 227
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.144e-36 Identity = 73/140 (52.14%), Postives = 104/140 (74.29%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAG-GNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EF+HLP K+F DF+ +R+EI +TD+E G +K +S I L IFSP+V+++TLVDLPG+TKV V QP I I M+ S+I++P+C+ILA++PAN DLA SDA++I+ DP G RT G++TK+D+MD+GT+A L Sbjct: 87 EFMHLPKKKFTDFAAVRQEISDETDRETGRSSKVISTVPIHLSIFSPNVVNLTLVDLPGLTKVAVDGQPESIVQDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGDRTFGVLTKIDLMDQGTNAVDIL 226
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.951e-36 Identity = 74/141 (52.48%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTLI 425 GEF H RF +F EI+ EI+ +T++ AG NK +S + I LKI+SP V+ +TLVDLPG+T+V + +QP DIE +I++MI+ YI P+ +ILA+TPAN D+ SDAL++A DP G RTIG++TKLD+MD+GT A L+ Sbjct: 236 GEFGHTGTNRF-NFQEIKEEIERETERIAGPNKDISSEPIVLKIYSPKVVPLTLVDLPGLTRVAIEDQPPDIEEKIKSMIIDYISNPNSIILAITPANQDIVTSDALKLAQQVDPLGKRTIGVLTKLDLMDKGTDAIDILL 375
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 7.431e-28 Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ I + AG G+SDK I L + SPHV D+TL+DLPGIT+V VG QPADI +I+ +I +YI++ + L V P+N D+A ++AL +A DPDG RTIGI+TK D++DRGT Sbjct: 133 DPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQKVDPDGDRTIGILTKPDLVDRGT 254
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.656e-27 Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ I + AG G+SDK I L + SPHV D+TL+DLPGIT+V VG QP+DI +I+ +I +YI++ + L V P+N D+A ++AL +A DPDG RTIGI+TK D++DRGT Sbjct: 133 DPSEVEEAINTGQNHIAGVGLGISDKLISLDVSSPHVPDLTLIDLPGITRVAVGNQPSDIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGT 254
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_CANFA (Interferon-induced GTP-binding protein Mx1 OS=Canis familiaris GN=MX1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.817e-27 Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ EI D AG +G+S + I L++ SPHV D+TL+DLPGIT+V VG QPADI + + +I YI + + L V P N D+A ++AL +A DPDG RTIGI+TK D++DRGT Sbjct: 131 DPSEVEVEINKAQDAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGT 252
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4) HSP 1 Score: 118.627 bits (296), Expect = 1.073e-26 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D S++ +EI AG G+S + I L++ SPHV D+TL+DLPGIT+V VG QP DIE +I+++I YI + + L V PAN D+A ++AL++A DP G RTIGI+TK D++D+GT Sbjct: 124 DASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQGDRTIGILTKPDLVDKGT 245
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.401e-26 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D S++ +EI AG G+S + I L++ SPHV D+TL+DLPGIT+V VG QP DIE +I+++I YI + + L V PAN D+A ++AL++A DP G RTIGI+TK D++D+GT Sbjct: 130 DASQVEKEISEAQIAIAGEGMGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPHDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQDVDPQGDRTIGILTKPDLVDKGT 251
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_PIG (Interferon-induced GTP-binding protein Mx1 OS=Sus scrofa GN=MX1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.401e-26 Identity = 58/122 (47.54%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D S++ +E+ A AG G+S + I L++ SPHV D+TL+DLPGIT+V VG QP DIE +I+++I YI + + L V P N D+A ++AL++A DP+G RTIGI+TK D++D+GT Sbjct: 136 DASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGT 257
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_OTABY (Interferon-induced GTP-binding protein Mx1 OS=Otaria byronia GN=MX1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.830e-26 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSA 410 D SE+ EI + AG +G+S + I L++ SPHV D+TL+DLPGIT+V VG QPADI + + +I YI + + L V P N D+A ++AL +A DPDG RTIGI+TK D++DRGT + Sbjct: 133 DPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGTES 256 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |