CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_EUMJU (Interferon-induced GTP-binding protein Mx1 OS=Eumetopias jubatus GN=MX1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.830e-26 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSA 410 D SE+ EI + AG +G+S + I L++ SPHV D+TL+DLPGIT+V VG QPADI + + +I YI + + L V P N D+A ++AL +A DPDG RTIGI+TK D++DRGT + Sbjct: 133 DPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAEEVDPDGDRTIGILTKPDLVDRGTES 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 3.122e-26 Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ I + AG G+SDK I L + SP+V D+TL+DLPGIT+V VG QPADI +I+ +I +YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++DRGT Sbjct: 128 DPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDRGT 249
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.122e-26 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 S + REI + AG +S I L++ SPHV D+TL+DLPGIT+V VG+QPADIE +I+ +I YI++ + L V P+N D+A ++AL++A DP G RTIGI+TK D++DRGT Sbjct: 128 SLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTEALKMAQEVDPQGDRTIGILTKPDLVDRGT 247
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.078e-26 Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 3 Query: 30 RFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 +F D S++ +EI+ + AG G+S + I L+I SP V D+TL+DLPGIT+V VG QP DI +I+ +I +YI++ + L V P N D+A ++AL +A DP+G RTIG++TK D++DRGT Sbjct: 179 QFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPEVPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMAQEVDPNGDRTIGVLTKPDLVDRGT 303
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.078e-26 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ +EI + AG G+S + I L+I S V D+TL+DLPGIT+V VG QPADI +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT Sbjct: 135 DASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4) HSP 1 Score: 116.701 bits (291), Expect = 4.078e-26 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ +EI + AG G+S + I L+I S V D+TL+DLPGIT+V VG QPADI +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT Sbjct: 135 DASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_HORSE (Interferon-induced GTP-binding protein Mx1 OS=Equus caballus GN=MX1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26 Identity = 54/119 (45.38%), Postives = 84/119 (70.59%), Query Frame = 3 Query: 48 EIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 ++ +++ + AG G+S + + L++ SPHV D+TL+DLPGIT+V VG QPADI +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT Sbjct: 138 DVEEQVRKAQNVLAGEGVGISQELVTLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_PHOVI (Interferon-induced GTP-binding protein Mx1 OS=Phoca vitulina GN=MX1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.084e-26 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSA 410 D SE+ EI + AG +G+S + I L++ SPHV D+TL+DLPGIT+V VG QPADI + + +I YI + + L V P N D+A ++AL +A DP G RTIGI+TK D++DRGT + Sbjct: 133 DPSEVEVEISKAQNVIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPSGDRTIGILTKPDLVDRGTES 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.186e-25 Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRG 401 D S++ REI+ D AG G+S + I L++ SP V D+TL+DLPGIT+V VG QP DI +I+ +I YI++ + L V P N D+A ++AL++A DP+G RTIGI+TK D++D G Sbjct: 178 DPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDTG 298
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_SHEEP (Interferon-induced GTP-binding protein Mx2 OS=Ovis aries GN=MX2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25 Identity = 57/126 (45.24%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 27 KRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 ++ ++ SE+ REI+ + AG G+S + I L++ SP V D+TL+DLPGIT+V V QP DI +I+ +I +YI++ + L V P N D+A ++AL +A DPDG RTIGI+TK D++D+GT Sbjct: 177 QQLHNPSEVEREIRRAQNIIAGNGVGISHELINLEVTSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKTYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDKGT 302 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |