CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.550e-25 Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRG 401 D SE+ I + AG G+SDK I L + SP+V D+TL+DLPGIT+V VG QPADI +I+ +I +YI++ + L V P+N D+A ++AL +A DP+G RTIG++TK D++DRG Sbjct: 101 DPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGVLTKPDLVDRG 221
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_MACMU (Interferon-induced GTP-binding protein Mx1 OS=Macaca mulatta GN=MX1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.024e-25 Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D SE+ +EI + AG G+S + I L+I S V D+TL+DLPGIT+V VG QP DI +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT Sbjct: 135 DASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPPDIGYKIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_HUMAN (Interferon-induced GTP-binding protein Mx2 OS=Homo sapiens GN=MX2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.452e-25 Identity = 56/122 (45.90%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D ++ +EI + AG +G+S + I L+I SP V D+T++DLPGIT+V V QP DI +I+ +I YI++ + L V P N D+A ++AL +A DP+G RTIGI+TK D+MDRGT Sbjct: 182 DPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGT 303
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_MACMU (Interferon-induced GTP-binding protein Mx2 OS=Macaca mulatta GN=MX2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.690e-25 Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D ++ +EI + AG G+S + I L+I SP V D+T++DLPGI +V VG QP DI +I+ +I YI++ + L V P N D+A ++AL +A DP+G RTIGI+TK D+MDRGT Sbjct: 182 DPGQVEKEIHKAQNVMAGNGLGISHELISLEITSPEVPDLTIIDLPGIARVAVGNQPRDIGLQIKALIKRYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGT 303
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_BOVIN (Interferon-induced GTP-binding protein Mx2 OS=Bos taurus GN=MX2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.713e-24 Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 SE+ EI+ + AG G+S + I L+I SP V D+TL+DLPGIT+V V QP DI +I+ +I YI++ + L V P N D+A ++AL +A DPDG RTIGI+TK D++D+GT Sbjct: 180 SEVEWEIRRAQNIIAGNGLGISHELINLEITSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKKYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDKGT 299
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.817e-24 Identity = 55/126 (43.65%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 27 KRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 K D +++ ++I+ D+ AG G+SD I L+I SP V D+TL+DLPGI +V V QP +I +I+ +I +IK+ + L V P N D+A ++AL++A DPDG RT+GI+TK D++D+GT Sbjct: 96 KEIEDPADVEKKIRDAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFIKRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGT 221
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.817e-24 Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 27 KRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 K D S++ +I+ D+ AG G+SD I L+I SP V D+TL+DLPGI +V V QP DI +I+ +I +I + + L V P N D+A ++AL++A DPDG RT+GI+TK D++D+GT Sbjct: 94 KELEDPSDVENKIREAQDEMAGVGVGISDDLISLEIASPDVPDLTLIDLPGIARVAVKGQPEDIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGT 219
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MXA_DANRE (Interferon-induced GTP-binding protein MxA OS=Danio rerio GN=mxa PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.474e-23 Identity = 53/124 (42.74%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 33 FYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 F D +E+ ++I+ D+ AG G+S++ I L+I S V D+TL+DLPGI +V V QP +I +I+ +I ++ + + L V P N D+A ++ALQ+A DPDG RT+GI+TK D++D+GT Sbjct: 100 FDDPAEVEKKIRQAQDEMAGAGVGISEELISLQITSADVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTRQETINLVVVPCNVDIATTEALQMAQAEDPDGERTLGILTKPDLVDKGT 223
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_CTEID (Interferon-induced GTP-binding protein Mx OS=Ctenopharyngodon idella GN=mx PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.231e-23 Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 3 Query: 27 KRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRG 401 K+ D +EI + AG +G+S + I L+I S V D+TL+DLPGI +V G QP DIE +I+ +I YIK+ + L V PAN D+A ++ALQ+A D G RT+GI+TK D++D+G Sbjct: 107 KKLKDPAEIENAVLKAQTVLAGTGEGISHEMITLEIQSSDVPDLTLIDLPGIARVATGNQPKDIEKQIKDLIEKYIKRQETISLVVVPANIDIATTEALQMASKVDSTGQRTLGILTKPDLVDKG 231
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MXB_DANRE (Interferon-induced GTP-binding protein MxB OS=Danio rerio GN=mxb PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 4.220e-23 Identity = 53/124 (42.74%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 33 FYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 F D +E+ ++I+ D+ AG G+S++ I L+I S +V D+TL+DLPGI +V V QP +I +I+ +I +I + + L V P N D+A ++ALQ+A DP+G RT+GI+TK D++D+GT Sbjct: 100 FDDPAEVEKKIREAQDEMAGAGVGISEELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRMFITKQETINLVVVPCNVDIATTEALQMAQAEDPEGERTLGILTKPDLVDKGT 223 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |