CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_ANAPL (Interferon-induced GTP-binding protein Mx OS=Anas platyrhynchos GN=MX PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 SE+ I+ D AG +S + I L+I SP+V D+TL+DLPGI +V + QP DI +I+ +I I + L V P N D+A ++AL++A DP G RT+GI+TK D++D GT Sbjct: 198 SEVENAIRNAQDVVAGTKGNISGELISLEICSPYVPDLTLIDLPGIARVAMRNQPQDIGEQIKKLIKKIISSKETINLVVVPCNVDIATTEALKMAQEVDPKGERTLGILTKPDLVDIGT 317
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_ICTPU (Interferon-induced GTP-binding protein Mx2 OS=Ictalurus punctatus GN=mx2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.960e-20 Identity = 48/129 (37.21%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTLI 425 D +++ + I+ ++ AG G+SDK I L++ S +V D+T++DLPGIT+V V +QP +I + + +I +I + + L V P N D+A ++AL++A DP+G RT G++TK D++D+G+ I Sbjct: 97 DPADVEQMIRKAQNEIAGTGMGISDKLISLEVTSSNVPDLTVIDLPGITRVAVKDQPENIGDQSKRLIKKFITKQETINLVVVPCNVDIATTEALKMALEVDPNGERTFGVLTKPDLVDKGSEETVVSI 225
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae GN=MGM1 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 4.367e-20 Identity = 53/128 (41.41%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 21 PGKRFY---DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMD 395 P R Y DF E++R + + + ++ VS++ I+L I S V D++LVDLPG +V +QP +++ +IR + Y+ P+ +ILA++ A+ DLANS AL+ + ADP G RTIG+ITKLD++D Sbjct: 266 PSMRLYNIKDFKEVKRMLM-ELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYIQVEAADQPIELKTKIRDLCEKYLTAPN-IILAISAADVDLANSSALKASKAADPKGLRTIGVITKLDLVD 391
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 51/130 (39.23%), Postives = 84/130 (64.62%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIM 392 GEF + + DFS+I+ I + ++GV D IRL I++ H+ +++L+DLPG ++ +QPAD++ +I + YI++P+ +ILAV A+ DLANS AL+ + DP G RTIG++TK+D++ Sbjct: 316 GEFSGVQLGKITDFSKIQH-ILTDLNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKLCEKYIREPN-IILAVCAADVDLANSAALRASRRVDPLGLRTIGVVTKMDLV 443
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: OPA1_DANRE (Dynamin-like 120 kDa protein, mitochondrial OS=Danio rerio GN=opa1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.839e-11 Identity = 34/128 (26.56%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 D + +R EI+ + K + VS + I L + P + + LVDLPG+ AD + I ++ +Y++ P+ +IL + + D S + DP G RTI ++TK+D+ ++ ++ + + Sbjct: 361 DLAALRHEIELRMRKSVKEGQTVSPETISLSVKGPGIQRMVLVDLPGVISTVTTGMAADTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPQGKRTIFVLTKVDLAEKNLASPSRI 488 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |