CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALNS (Succinylornithine transaminase OS=Salmonella newport (strain SL254) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRYQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALHS (Succinylornithine transaminase OS=Salmonella heidelberg (strain SL476) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALG2 (Succinylornithine transaminase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALEP (Succinylornithine transaminase OS=Salmonella enteritidis PT4 (strain P125109) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALDC (Succinylornithine transaminase OS=Salmonella dublin (strain CT_02021853) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALCH (Succinylornithine transaminase OS=Salmonella choleraesuis GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALA4 (Succinylornithine transaminase OS=Salmonella agona (strain SL483) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECOSM (Succinylornithine transaminase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 47/154 (30.52%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + +HHA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIHHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_SULSO (Acetylornithine/acetyl-lysine aminotransferase OS=Sulfolobus solfataricus GN=argD PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 44/158 (27.85%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAV 475 AR T I++ +N++HG + G + T ++ +P+ + G + +V L + A + E +QG GG+I ++ ++ + +K L I DEVQ GF RTG W ++ + PDI+T K IG G P+ AV Sbjct: 108 ARKITKRRKIVAFKNSFHGRSMGALSVTWNKKYR--------------EPFEPLIGPVEFLEYNNVDSLKSI--TEDTAAVIVEPVQGEGGVIPAKKEFVKSLREVTEKVNALLIIDEVQTGFGRTGK-IWAYQHFDIKPDILTAGKAIGGGFPVSAV 248
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_LACLA (Acetylornithine aminotransferase OS=Lactococcus lactis subsp. lactis GN=argD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 I++ + +HG G M AT Q +Q G L P+ F DV L + + E IQG GG++ ++P ++ A+ KS ++ G L I DE+Q G RTG F FE PDI T+AK + NGIP GA++ Sbjct: 114 ILAFTDGFHGRTFGAMSATMQEK-----IQAGFSPLL-PNFVASPFN--------DVVALEQILEKEKIGAIIFEIIQGEGGVLPISPDFVEAL-KSCQQKGILLIIDEIQTGIGRTGKLF-AFEHFDFEPDIFTLAKALANGIPTGAML 247 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |